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BaseInfo

ncRNA ID	novel_zma_miR7372
Species	Zea mays
Class	miRNA
Genome position	Chr8:129744747-129744929 [-]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	1 - UUGAUGUGACUCGGGCUAAACUUU - 24
Stem-loop(if miRNA)	--AA        CUA         A       ACC  CGUUC       U        UC      UAAAACUAAUUUCUCAGCCGAAGAUU     UUUAGCCC   UCACAUCGA UGUUUGA   UC     GGGGUAU AAAUGUAG  GGAUUA                          A     ||||||||   ||||||||| |||||||   ||     ||||||| ||||||||  ||||||     AAAUCGGG   AGUGUAGUU ACAAACU   AG     CCUCAUA UUUAUAUC  GGGUUG                          A UUUC        CUC         C       GAA  UUUAU       C        -U      GUUGACAUGAUCUAAGCAGAGUGAAA
Stem-loop sequence	AAUUUAGCCCCUAUCACAUCGAAUGUUUGAACCUCCGUUCGGGGUAUUAAAUGUAGUCGGAUUAUAAAACUAAUUUCUCAGCCGAAGAUUAAAAAGUGAGACGAAUCUAGUACAGUUGGUUGGGUCUAUAUUUCAUACUCCUAUUUGAAAGUCAAACACUUGAUGUGACUCGGGCUAAACUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084930.2	ncRNA:24   UUUCAAAUCGGGCUCAGUGUAGUU   1   |||||||||||||=|||||||||| targets:144   AAAGUUUAGCCCGGGUCACAUCAA   167 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0209B02 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008671848.2	ncRNA:24   UUUCAAAUCGGGCUCAGUGUAGUU   1   |||||||||||||=|||||||||| targets:661   AAAGUUUAGCCCGGGUCACAUCAA   684 Target Full Sequence	1.5	PREDICTED: Zea mays subtilisin-like protease SBT3.3 (LOC103647304), mRNA	NA	coding protein	psRNATarget
XM_020540529.1	ncRNA:24   UUUCAAAUCGGGCUCAGUGUAGUU   1   |||||||||||||=|||||||||| targets:1104   AAAGUUUAGCCCGGGUCACAUCAA   1127 Target Full Sequence	1.5	PREDICTED: Zea mays catalytic/ hydrolase (LOC100282156), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008654002.2	ncRNA:24   UUUCAAAUCGGGCUCAGUGUAGUU   1   ||||||||||=||=|||||||||| targets:704   AAAGUUUAGCUCGGGUCACAUCAA   727 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103632177), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008654001.2	ncRNA:24   UUUCAAAUCGGGCUCAGUGUAGUU   1   ||||||||||=||=|||||||||| targets:703   AAAGUUUAGCUCGGGUCACAUCAA   726 Target Full Sequence	2.5	PREDICTED: Zea mays hypothetical protein (LOC103632177), transcript variant X1, mRNA	NA	coding protein	psRNATarget