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BaseInfo

ncRNA ID	novel_zma_miR7371
Species	Zea mays
Class	miRNA
Genome position	Chr8:132504446-132504576 [-]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	1 - CAUCCGGUUCAGCCGCACCAGGUU - 24
Stem-loop(if miRNA)	--      C     C    A    A   -  AU            -C     UUAUUGGAAAUAUA   CCUGGU UGGCU AACC GAUG CAC GU  GGCCAGGGCUUU  UCUAG              U   |||||| ||||| |||| |||| ||| ||  ||||||||||||  |||||              A   GGACCA GCCGA UUGG CUAC GUG CA  UCGGUCCCGAGG  UAUAU              U UU      C     C    C    C   G  AC            UU     GUUUGAUAUAUAUA
Stem-loop sequence	CCUGGUCUGGCUCAACCAGAUGACACGUAUGGCCAGGGCUUUCUCUAGUUAUUGGAAAUAUAUAUAUAUAUAUAGUUUGUAUAUUUGGAGCCCUGGCUCAACGGUGCCAUCCGGUUCAGCCGCACCAGGUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU947728.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   ||=||||||||||||||||||||| targets:524   AAUCUGGUGCGGCUGAACCGGAUG   547 Target Full Sequence	0.0	Zea mays clone 355319 mRNA sequence	NA	coding protein	psRNATarget
EZ067585.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   |*||||||||*|||||||*||||| targets:100   AUCCUGGUGCUGCUGAACAGGAUG   123 Target Full Sequence	2.5	TSA: Zea mays contig03220, mRNA sequence	NA	coding protein	psRNATarget
AY111382.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   |*||||||||*|||||||*||||| targets:268   AUCCUGGUGCUGCUGAACAGGAUG   291 Target Full Sequence	2.5	Zea mays CL33901_-2 mRNA sequence	NA	coding protein	psRNATarget
BT063320.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   |*||||||||*|||||||*||||| targets:1230   AUCCUGGUGCUGCUGAACAGGAUG   1253 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0051O17 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174907.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   |*||||||||*|||||||*||||| targets:1230   AUCCUGGUGCUGCUGAACAGGAUG   1253 Target Full Sequence	2.5	Zea mays Cactin (LOC100382147), mRNA	NA	coding protein	psRNATarget
EU947983.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   =||*|||*||||||*||||||||| targets:587   GACGUGGGGCGGCUAAACCGGAUG   610 Target Full Sequence	2.5	Zea mays clone 368195 mRNA sequence	NA	coding protein	psRNATarget
BT035468.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   |*=|||||||*|||||*||||||| targets:550   AUUCUGGUGCCGCUGAUCCGGAUG   573 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0064K04 mRNA, complete cds	NA	coding protein	psRNATarget
EU956712.1	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   |*=|||||||*|||||*||||||| targets:1860   AUUCUGGUGCCGCUGAUCCGGAUG   1883 Target Full Sequence	2.5	Zea mays clone 1571354 spotted leaf protein 11 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001138397.2	ncRNA:24   UUGGACCACGCCGACUUGGCCUAC   1   |*=|||||||*|||||*||||||| targets:1993   AUUCUGGUGCCGCUGAUCCGGAUG   2016 Target Full Sequence	2.5	Zea mays uncharacterized LOC100193248 (LOC100193248), mRNA	NA	coding protein	psRNATarget