Search result

BaseInfo

ncRNA ID	novel_zma_miR7366
Species	Zea mays
Class	miRNA
Genome position	Chr4:6688941-6689064 [+]
Reference genome	RefGen_v4
Source	SRR1583942
Length	25
Mature sequence(if miRNA)	100 - GAAAUACGAUUUUUAGUGGCAGUUU - 124
Stem-loop(if miRNA)	--ACC              -       C                   UC  UA  A    UCA      GCCAUUAGAAAUCG AUUUCUA AGGUGGUUUCUUAAGAAAA  GU  CU UAAA   U      |||||||||||||| ||||||| |||||||||||||||||||  ||  || ||||   G      CGGUGAUUUUUAGC UAAAGAU UCCACUAAGGAAUUCUUUU  CG  GA AUUU   A UUUGA              A       A                   UA  --  C    UUA
Stem-loop sequence	ACCGCCAUUAGAAAUCGAUUUCUACAGGUGGUUUCUUAAGAAAAUCGUUACUAUAAAUCAUGAAUUUUUACAGGCAUUUUUCUUAAGGAAUCACCUAUAGAAAUACGAUUUUUAGUGGCAGUUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166343.1	ncRNA:25   UUUGACGGUGAUUUUUAGCAUAAAG   1   ||||*|||||||=|||||||||||| targets:38   AAACCGCCACUAGAAAUCGUAUUUC   62 Target Full Sequence	1.5	Sequence 4007 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238012.1	ncRNA:25   UUUGACGGUGAUUUUUAGCAUAAAG   1   ||||*|||||||=|||||||||||| targets:38   AAACCGCCACUAGAAAUCGUAUUUC   62 Target Full Sequence	1.5	Sequence 4007 from Patent EP2985353	NA	coding protein	psRNATarget
HI405882.1	ncRNA:25   UUUGACGGUGAUUUUUAGCAUAAAG   1   ||||*|||||||=|||||||||||| targets:38   AAACCGCCACUAGAAAUCGUAUUUC   62 Target Full Sequence	1.5	Sequence 4007 from Patent EP2074227	NA	coding protein	psRNATarget
HI402986.1	ncRNA:25   UUUGACGGUGAUUUUUAGCAUAAAG   1   ||||*|||||||=|||||||||||= targets:16   AAACCGCCACUAGAAAUCGUAUUUU   40 Target Full Sequence	2.5	Sequence 1111 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235116.1	ncRNA:25   UUUGACGGUGAUUUUUAGCAUAAAG   1   ||||*|||||||=|||||||||||= targets:16   AAACCGCCACUAGAAAUCGUAUUUU   40 Target Full Sequence	2.5	Sequence 1111 from Patent EP2985353	NA	coding protein	psRNATarget
JB163447.1	ncRNA:25   UUUGACGGUGAUUUUUAGCAUAAAG   1   ||||*|||||||=|||||||||||= targets:16   AAACCGCCACUAGAAAUCGUAUUUU   40 Target Full Sequence	2.5	Sequence 1111 from Patent EP2559767	NA	coding protein	psRNATarget