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BaseInfo

ncRNA ID	novel_zma_miR7364
Species	Zea mays
Class	miRNA
Genome position	Chr8:169020906-169021021 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	1 - AGAUCUAAUGUCUCUGGUUGCUUU - 24
Stem-loop(if miRNA)	--               G       UG              -    CCUUUCAAUACU   AGAUCUAAUGUCUCU GUUGCUU  UAUAUUUUGCAAAA AACA            A   ||||||||||||||| |||||||  |||||||||||||| ||||            C   UCUAGAUUACAGAGA CAACGAG  AUAUAAAACGUUUU UUGU            C CA               A       GA              G    AUUUUACCACCU
Stem-loop sequence	AGAUCUAAUGUCUCUGGUUGCUUUGUAUAUUUUGCAAAAAACACCUUUCAAUACUACCUCCACCAUUUUAUGUUGUUUUGCAAAAUAUAAGGAGCAACAAGAGACAUUAGAUCUAC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ092927.1	ncRNA:24   UUUC--GUUGGUCUCUGUAAUCUAGA   1   ||||--|||||||||||=|||||||| targets:75   AAAGAUCAACCAGAGACGUUAGAUCU   100 Target Full Sequence	1.5	TSA: Zea mays contig28576, mRNA sequence	NA	coding protein	psRNATarget
JB163844.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   |||-||||=||||||=|||||||| targets:120   AAA-CAACUAGAGACGUUAGAUCU   142 Target Full Sequence	2.5	Sequence 1508 from Patent EP2559767	NA	coding protein	psRNATarget
HI403383.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   |||-||||=||||||=|||||||| targets:120   AAA-CAACUAGAGACGUUAGAUCU   142 Target Full Sequence	2.5	Sequence 1508 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235513.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   |||-||||=||||||=|||||||| targets:120   AAA-CAACUAGAGACGUUAGAUCU   142 Target Full Sequence	2.5	Sequence 1508 from Patent EP2985353	NA	coding protein	psRNATarget
HI403274.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   |||-||||=||||||=|||||||| targets:121   AAA-CAACUAGAGACGUUAGAUCU   143 Target Full Sequence	2.5	Sequence 1399 from Patent EP2074227	NA	coding protein	psRNATarget
JB163735.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   |||-||||=||||||=|||||||| targets:121   AAA-CAACUAGAGACGUUAGAUCU   143 Target Full Sequence	2.5	Sequence 1399 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235404.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   |||-||||=||||||=|||||||| targets:121   AAA-CAACUAGAGACGUUAGAUCU   143 Target Full Sequence	2.5	Sequence 1399 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008646350.2	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   |||-||||=||||||=|||||||| targets:1715   AAA-CAACUAGAGACGUUAGAUCU   1737 Target Full Sequence	2.5	PREDICTED: Zea mays S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (LOC103625944), mRNA	NA	coding protein	psRNATarget
XM_020552764.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   *||*||||=||||||=|||||||| targets:3065   UAAUCAACUAGAGACGUUAGAUCU   3088 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008681116.2	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   *||*||||=||||||=|||||||| targets:3243   UAAUCAACUAGAGACGUUAGAUCU   3266 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase WNK8 (LOC103654279), transcript variant X1, mRNA	NA	coding protein	psRNATarget
JB163879.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   *=|*|||=|||||||=|||||||| targets:131   UGAUCAAUCAGAGACGUUAGAUCU   154 Target Full Sequence	2.5	Sequence 1543 from Patent EP2559767	NA	coding protein	psRNATarget
HI403418.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   *=|*|||=|||||||=|||||||| targets:131   UGAUCAAUCAGAGACGUUAGAUCU   154 Target Full Sequence	2.5	Sequence 1543 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235548.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   *=|*|||=|||||||=|||||||| targets:131   UGAUCAAUCAGAGACGUUAGAUCU   154 Target Full Sequence	2.5	Sequence 1543 from Patent EP2985353	NA	coding protein	psRNATarget
BT087210.1	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   *=|*||||=|||||||||||||=| targets:445   UGAUCAACUAGAGACAUUAGAUUU   468 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0076O09 mRNA, complete cds	NA	coding protein	psRNATarget
BT061436.2	ncRNA:24   UUUCGUUGGUCUCUGUAAUCUAGA   1   *||-||||=||||||||||*|||| targets:280   CAA-CAACUAGAGACAUUAUAUCU   302 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0145O04 mRNA, complete cds	NA	coding protein	psRNATarget