Search result

BaseInfo

ncRNA ID	novel_zma_miR7358
Species	Zea mays
Class	miRNA
Genome position	Chr7:103472349-103472538 [+]
Reference genome	RefGen_v4
Source	SRR2647391;SRR2647467
Length	24
Mature sequence(if miRNA)	1 - GAUCUCCUUCCAUGUCGCGUGGGU - 24
Stem-loop(if miRNA)	--           AUGU       -  --  AGA A  AGAGAGGAGAGCGGGGGCGAGAGAGACUGCCAUAGACGUGUGGAAUUGAGGAAGGGGAUCG   GAUCUCCUUCC    CGCGUGG GU  GC   C GC                                                             C   |||||||||||    ||||||| ||  ||   | ||                                                             G   CUAGGGGAAGG    GCGUACC CA  GA   C GG                                                             G CG           --GU       G  AG  --- -  CGUCGGGGGCAUCGGGGGCGCUAGGGCGGACGGUUCGUACCGCAGCGGCGCCGGCAACGGG
Stem-loop sequence	GAUCUCCUUCCAUGUCGCGUGGGUGCAGACAGCAGAGAGGAGAGCGGGGGCGAGAGAGACUGCCAUAGACGUGUGGAAUUGAGGAAGGGGAUCGCGGGGGCAACGGCCGCGGCGACGCCAUGCUUGGCAGGCGGGAUCGCGGGGGCUACGGGGGCUGCGGCAGGAACGCCAUGCGUGGGAAGGGGAUCGC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008650939.2	ncRNA:24   UGGG--UGC-GCUGUACCUUCCUCUAG   1   =|||--|||-||||||||||||||||* targets:1635   GCCCCAACGACGACAUGGAAGGAGAUG   1661 Target Full Sequence	3.0	PREDICTED: Zea mays uncharacterized LOC103629847 (LOC103629847), mRNA	NA	coding protein	psRNATarget
BT054171.1	ncRNA:24   UGGGUGCGCUGUACCUUCCUCUAG   1   |=*|=|*|||=||||||||||||= targets:1508   AUGCGCCCGAUAUGGAAGGAGAUU   1531 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0148C07 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152406.1	ncRNA:24   UGGGUGCGCUGUACCUUCCUCUAG   1   |=*|=|*|||=||||||||||||= targets:1508   AUGCGCCCGAUAUGGAAGGAGAUU   1531 Target Full Sequence	3.0	Zea mays uncharacterized LOC100279393 (LOC100279393), mRNA	NA	coding protein	psRNATarget