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BaseInfo

ncRNA ID	novel_zma_miR7355
Species	Zea mays
Class	miRNA
Genome position	Chr1:209372452-209372524 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	50 - ACAGAUCUUGGCGCCGAGCUACAA - 73
Stem-loop(if miRNA)	--              C      -     C      A   GUAGCUCGGCGCCA AGAUCU UGGCG CGAGCU C   |||||||||||||| |||||| ||||| |||||| G   CAUCGAGCCGCGGU UCUAGA ACCGC GCUCGA A AA              -      C     A      A
Stem-loop sequence	GUAGCUCGGCGCCACAGAUCUUGGCGCCGAGCUACGAAAGCUCGACGCCACAGAUCUUGGCGCCGAGCUACAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008672912.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   |**||||||||||||||||||||| targets:366   UCCUAGCUCGGCGCCAAGAUCUGU   389 Target Full Sequence	0.0	PREDICTED: Zea mays glycine-rich protein DOT1-like (LOC103648440), mRNA	NA	coding protein	psRNATarget
XM_008652503.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   |**||||||||||||||||||||| targets:399   UCCUAGCUCGGCGCCAAGAUCUGU   422 Target Full Sequence	0.0	PREDICTED: Zea mays rRNA 2'-O-methyltransferase fibrillarin-like (LOC103631637), mRNA	NA	coding protein	psRNATarget
JB166443.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   **||||||||||||||||||||*| targets:142   AGGUAGCUCGGCGCCAAGAUCUAU   165 Target Full Sequence	1.5	Sequence 4107 from Patent EP2559767	NA	coding protein	psRNATarget
LQ238112.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   **||||||||||||||||||||*| targets:142   AGGUAGCUCGGCGCCAAGAUCUAU   165 Target Full Sequence	1.5	Sequence 4107 from Patent EP2985353	NA	coding protein	psRNATarget
HI405982.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   **||||||||||||||||||||*| targets:142   AGGUAGCUCGGCGCCAAGAUCUAU   165 Target Full Sequence	1.5	Sequence 4107 from Patent EP2074227	NA	coding protein	psRNATarget
XM_020547329.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   *|**||||||||||||||||||*| targets:1834   AUCGAGCUCGGCGCCAAGAUCUAU   1857 Target Full Sequence	1.5	PREDICTED: Zea mays Flavin-containing monooxygenase FMO GS-OX5 (LOC100272315), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547327.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   *|**||||||||||||||||||*| targets:1859   AUCGAGCUCGGCGCCAAGAUCUAU   1882 Target Full Sequence	1.5	PREDICTED: Zea mays Flavin-containing monooxygenase FMO GS-OX5 (LOC100272315), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008668082.2	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   *|**||||||||||||||||||*| targets:1866   AUCGAGCUCGGCGCCAAGAUCUAU   1889 Target Full Sequence	1.5	PREDICTED: Zea mays Flavin-containing monooxygenase FMO GS-OX5 (LOC100272315), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008664820.2	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:10   GCCUACCUCGGCGCCAAGAUCUAU   33 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103641469 (LOC103641469), mRNA	NA	coding protein	psRNATarget
XM_020544295.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:55   GCCUACCUCGGCGCCAAGAUCUAU   78 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103644543 (LOC103644543), mRNA	NA	coding protein	psRNATarget
XM_020548134.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:32   GCCUACCUCGGCGCCAAGAUCUAU   55 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109943956 (LOC109943956), mRNA	NA	coding protein	psRNATarget
XM_020545942.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:212   GCCUACCUCGGCGCCAAGAUCUAU   235 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109943114 (LOC109943114), mRNA	NA	coding protein	psRNATarget
XM_008666282.2	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:212   GCCUACCUCGGCGCCAAGAUCUAU   235 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103643129 (LOC103643129), mRNA	NA	coding protein	psRNATarget
XM_020545943.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:212   GCCUACCUCGGCGCCAAGAUCUAU   235 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109943115 (LOC109943115), mRNA	NA	coding protein	psRNATarget
XM_020541347.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:216   GCCUACCUCGGCGCCAAGAUCUAU   239 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109940949 (LOC109940949), mRNA	NA	coding protein	psRNATarget
XM_008652363.2	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:216   GCCUACCUCGGCGCCAAGAUCUAU   239 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103631452 (LOC103631452), mRNA	NA	coding protein	psRNATarget
XM_020537732.1	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:281   GCCUACCUCGGCGCCAAGAUCUAU   304 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC109939552 (LOC109939552), mRNA	NA	coding protein	psRNATarget
XM_008654703.2	ncRNA:24   AACAUCGAGCCGCGGUUCUAGACA   1   ***||*||||||||||||||||*| targets:988   GCCUACCUCGGCGCCAAGAUCUAU   1011 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC103633011 (LOC103633011), mRNA	NA	coding protein	psRNATarget
XM_020538176.1	ncRNA:24   AACA---UCGAGCCGCGGUUCUAGACA   1   *|||---=|*|||||||||||||||*| targets:343   GUGUCAGGGGUCGGCGCCAAGAUCUAU   369 Target Full Sequence	2.5	PREDICTED: Zea mays pollen-specific leucine-rich repeat extensin-like protein 1 (LOC109939828), mRNA	NA	coding protein	psRNATarget