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BaseInfo

ncRNA ID novel_zma_miR7354
Species Zea mays
Class miRNA
Genome position Chr7:103646422-103646502 [-]
Reference genome RefGen_v4
Source SRR2647391
Length 24
Mature sequence(if miRNA) 1 - CUCUGAGGUUUCUACACAUAGUGU - 24
Stem-loop(if miRNA) --                 A            -     - U
  ACUAUGUGUAGAAACCU AGAGAACUACAU UGAAA C C
  ||||||||||||||||| |||||||||||| ||||| | U
  UGAUACACAUCUUUGGA UCUCUUGAUGUG ACUUU G A
UG                 G            U     A U
Stem-loop sequence ACUAUGUGUAGAAACCUAAGAGAACUACAUUGAAACUCUAUGAUUUCAUGUGUAGUUCUCUGAGGUUUCUACACAUAGUGU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
LQ235378.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||||||||||||||||||*||||
targets:9   ACACUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1373 from Patent EP2985353 NA coding protein psRNATarget
JB163709.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||||||||||||||||||*||||
targets:9   ACACUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1373 from Patent EP2559767 NA coding protein psRNATarget
HI403248.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||||||||||||||||||*||||
targets:9   ACACUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1373 from Patent EP2074227 NA coding protein psRNATarget
JB163655.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1319 from Patent EP2559767 NA coding protein psRNATarget
HI403236.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1361 from Patent EP2074227 NA coding protein psRNATarget
LQ235324.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1319 from Patent EP2985353 NA coding protein psRNATarget
HI403194.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1319 from Patent EP2074227 NA coding protein psRNATarget
HI403245.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1370 from Patent EP2074227 NA coding protein psRNATarget
JB163654.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1318 from Patent EP2559767 NA coding protein psRNATarget
HI403238.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1363 from Patent EP2074227 NA coding protein psRNATarget
JB163671.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1335 from Patent EP2559767 NA coding protein psRNATarget
HI403193.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1318 from Patent EP2074227 NA coding protein psRNATarget
JB163668.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1332 from Patent EP2559767 NA coding protein psRNATarget
LQ235337.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1332 from Patent EP2985353 NA coding protein psRNATarget
HI403210.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1335 from Patent EP2074227 NA coding protein psRNATarget
JB163710.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1374 from Patent EP2559767 NA coding protein psRNATarget
HI403207.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1332 from Patent EP2074227 NA coding protein psRNATarget
LQ235366.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1361 from Patent EP2985353 NA coding protein psRNATarget
JB163706.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1370 from Patent EP2559767 NA coding protein psRNATarget
HI403249.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1374 from Patent EP2074227 NA coding protein psRNATarget
LQ235379.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1374 from Patent EP2985353 NA coding protein psRNATarget
LQ235375.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1370 from Patent EP2985353 NA coding protein psRNATarget
JB163697.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1361 from Patent EP2559767 NA coding protein psRNATarget
LQ235340.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1335 from Patent EP2985353 NA coding protein psRNATarget
LQ235323.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1318 from Patent EP2985353 NA coding protein psRNATarget
LQ235368.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1363 from Patent EP2985353 NA coding protein psRNATarget
JB163699.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||=|||||||||||||||*||||
targets:9   ACAUUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1363 from Patent EP2559767 NA coding protein psRNATarget
LQ235352.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  =||||||||||||||||||*||||
targets:80   GCACUAUGUGUAGAAACCUAAGAG   103

1.5 Sequence 1347 from Patent EP2985353 NA coding protein psRNATarget
HI403222.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  =||||||||||||||||||*||||
targets:80   GCACUAUGUGUAGAAACCUAAGAG   103

1.5 Sequence 1347 from Patent EP2074227 NA coding protein psRNATarget
JB163683.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  =||||||||||||||||||*||||
targets:80   GCACUAUGUGUAGAAACCUAAGAG   103

1.5 Sequence 1347 from Patent EP2559767 NA coding protein psRNATarget
HI403209.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |=|||||||||||||||||*||||
targets:86   AUACUAUGUGUAGAAACCUAAGAG   109

1.5 Sequence 1334 from Patent EP2074227 NA coding protein psRNATarget
LQ235339.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |=|||||||||||||||||*||||
targets:86   AUACUAUGUGUAGAAACCUAAGAG   109

1.5 Sequence 1334 from Patent EP2985353 NA coding protein psRNATarget
JB163670.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |=|||||||||||||||||*||||
targets:86   AUACUAUGUGUAGAAACCUAAGAG   109

1.5 Sequence 1334 from Patent EP2559767 NA coding protein psRNATarget
JB163714.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||*|||||||||||||||*||||
targets:9   ACAGUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1378 from Patent EP2559767 NA coding protein psRNATarget
LQ235383.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||*|||||||||||||||*||||
targets:9   ACAGUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1378 from Patent EP2985353 NA coding protein psRNATarget
HI403253.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |||*|||||||||||||||*||||
targets:9   ACAGUAUGUGUAGAAACCUAAGAG   32

1.5 Sequence 1378 from Patent EP2074227 NA coding protein psRNATarget
LQ235299.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |=||||||||*||||||||*||||
targets:7   AUACUAUGUGCAGAAACCUAAGAG   30

2.5 Sequence 1294 from Patent EP2985353 NA coding protein psRNATarget
HI403169.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |=||||||||*||||||||*||||
targets:7   AUACUAUGUGCAGAAACCUAAGAG   30

2.5 Sequence 1294 from Patent EP2074227 NA coding protein psRNATarget
JB163630.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  |=||||||||*||||||||*||||
targets:7   AUACUAUGUGCAGAAACCUAAGAG   30

2.5 Sequence 1294 from Patent EP2559767 NA coding protein psRNATarget
HI403234.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  =||||||||*|||||||||*||||
targets:12   GCACUAUGUUUAGAAACCUAAGAG   35

2.5 Sequence 1359 from Patent EP2074227 NA coding protein psRNATarget
JB163695.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  =||||||||*|||||||||*||||
targets:12   GCACUAUGUUUAGAAACCUAAGAG   35

2.5 Sequence 1359 from Patent EP2559767 NA coding protein psRNATarget
LQ235364.1
ncRNA:24   UGUGAUACACAUCUUUGGAGUCUC   1
  =||||||||*|||||||||*||||
targets:12   GCACUAUGUUUAGAAACCUAAGAG   35

2.5 Sequence 1359 from Patent EP2985353 NA coding protein psRNATarget
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