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BaseInfo

ncRNA ID	novel_zma_miR7352
Species	Zea mays
Class	miRNA
Genome position	Chr7:151528622-151528733 [-]
Reference genome	RefGen_v4
Source	SRR2647391
Length	23
Mature sequence(if miRNA)	90 - UAAUAUUGAUCUCAAUCCACGUG - 112
Stem-loop(if miRNA)	--UAA      U      C          ---A         G    UCGA        U      UAUUGA CUCAAU CACGUGUAUU    UGUAUUGAG UUGU    AAUAUAAG U      |||||| |||||| ||||||||||    ||||||||| ||||    ||||||||      AUAAUU GAGUUA GUGUACAUAA    ACAUAACUC GACA    UUGUAUUU A AGAUG      U      A          CUAC         -    ----        G
Stem-loop sequence	UAAUAUUGAUCUCAAUCCACGUGUAUUAUGUAUUGAGGUUGUUCGAAAUAUAAGUUAGUUUAUGUUACAGCUCAAUACACAUCAAUACAUGUGAAUUGAGUUUAAUAGUAGA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084723.2	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=|||||||||||||||||||| targets:167   CAUGUGGAUUGAGAUCAAUAUUA   189 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0166K06 mRNA, complete cds	NA	coding protein	psRNATarget
HI403308.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=||||||||||=||||||||| targets:118   CAUGUGGAUUGAGGUCAAUAUUA   140 Target Full Sequence	1.5	Sequence 1433 from Patent EP2074227	NA	coding protein	psRNATarget
HI403308.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=|||||||*|||||||||||| targets:61   CAUGUGGAUUAAGAUCAAUAUUA   83 Target Full Sequence	1.5	Sequence 1433 from Patent EP2074227	NA	coding protein	psRNATarget
JB163769.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=||||||||||=||||||||| targets:118   CAUGUGGAUUGAGGUCAAUAUUA   140 Target Full Sequence	1.5	Sequence 1433 from Patent EP2559767	NA	coding protein	psRNATarget
JB163769.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=|||||||*|||||||||||| targets:61   CAUGUGGAUUAAGAUCAAUAUUA   83 Target Full Sequence	1.5	Sequence 1433 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235438.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=||||||||||=||||||||| targets:118   CAUGUGGAUUGAGGUCAAUAUUA   140 Target Full Sequence	1.5	Sequence 1433 from Patent EP2985353	NA	coding protein	psRNATarget
LQ235438.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=|||||||*|||||||||||| targets:61   CAUGUGGAUUAAGAUCAAUAUUA   83 Target Full Sequence	1.5	Sequence 1433 from Patent EP2985353	NA	coding protein	psRNATarget
EZ111052.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=|||||||||||||||||*|= targets:197   CAUGUGGAUUGAGAUCAAUAAUG   219 Target Full Sequence	2.5	TSA: Zea mays contig46713, mRNA sequence	NA	coding protein	psRNATarget
EZ516950.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=|||||||||||||||||*|= targets:63   CAUGUGGAUUGAGAUCAAUAAUG   85 Target Full Sequence	2.5	TSA: Zea mays cultivar W22 CL342Contig1.betc, mRNA sequence	NA	coding protein	psRNATarget
JB163780.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||*||*|||||||=||||||||| targets:83   CAAGUUGAUUGAGGUCAAUAUUA   105 Target Full Sequence	2.5	Sequence 1444 from Patent EP2559767	NA	coding protein	psRNATarget
HI403319.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||*||*|||||||=||||||||| targets:83   CAAGUUGAUUGAGGUCAAUAUUA   105 Target Full Sequence	2.5	Sequence 1444 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235449.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||*||*|||||||=||||||||| targets:83   CAAGUUGAUUGAGGUCAAUAUUA   105 Target Full Sequence	2.5	Sequence 1444 from Patent EP2985353	NA	coding protein	psRNATarget
HI402950.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=||*||||||||||||||*|| targets:81   CAUGUAGAUUGAGAUCAAUACUA   103 Target Full Sequence	2.5	Sequence 1075 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235080.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=||*||||||||||||||*|| targets:81   CAUGUAGAUUGAGAUCAAUACUA   103 Target Full Sequence	2.5	Sequence 1075 from Patent EP2985353	NA	coding protein	psRNATarget
JB163411.1	ncRNA:23   GUGCACCUAACUCUAGUUAUAAU   1   ||=||*||||||||||||||*|| targets:81   CAUGUAGAUUGAGAUCAAUACUA   103 Target Full Sequence	2.5	Sequence 1075 from Patent EP2559767	NA	coding protein	psRNATarget