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BaseInfo

ncRNA ID novel_zma_miR7350
Species Zea mays
Class miRNA
Genome position Chr7:169113763-169113857 [-]
Reference genome RefGen_v4
Source SRR2647391
Length 24
Mature sequence(if miRNA) 72 - GAACUACAUUUUCCCAUGGGAUUU - 95
Stem-loop(if miRNA) --                UGG     C        CA    -A    GA
  GAACUACAUUUUCCCA   GAUUU UAUUUUUU  UGAG  AAAU  A
  ||||||||||||||||   ||||| ||||||||  ||||  ||||
  CUUGGUGUAAAAGGGU   CUAAA GUAAAAAG  AUUC  UUUA  C
CC                UCA     A        --    CC    AU
Stem-loop sequence GAACUACAUUUUCCCAUGGGAUUUCUAUUUUUUCAUGAGAAAAUGAACUAAUUUCCCUUAGAAAAAUGAAAAUCACUUGGGAAAAUGUGGUUCCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
BT063756.1
ncRNA:24   UUUAGGGUACCCUUUUACAUCAAG   1
  |||||||*|||||||||||*||||
targets:1670   AAAUCCCUUGGGAAAAUGUUGUUC   1693

2.5 Zea mays full-length cDNA clone ZM_BFc0104A15 mRNA, complete cds NA coding protein psRNATarget
EZ071949.1
ncRNA:24   UUUAGGGUACCCUUUUACAUCAAG   1
  =|||||||*|||||||||*|||||
targets:134   GAAUCCCAAGGGAAAAUGGAGUUC   157

2.5 TSA: Zea mays contig07586, mRNA sequence NA coding protein psRNATarget
XM_020552563.1
ncRNA:24   UUUAGGGUACCCUUUUACAUCAAG   1
  =||||||*||||||||||*|||||
targets:442   GAAUCCCUUGGGAAAAUGGAGUUC   465

2.5 PREDICTED: Zea mays probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 (LOC103653427), transcript variant X2, mRNA NA coding protein psRNATarget