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BaseInfo

ncRNA ID	ath-miRf10081-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - UCGACCUCGUGGUCGAGUGG - NA
Stem-loop(if miRNA)	GG         U  U      G  A G G   -GA  G  GG   CACUCGACC CG GGUCGA UG U U AUC   GU AU  U   ||||||||| || |||||| || | | |||   || ||   GUGAGCUGG GC CCAGCU AC G A UAG   UA UG  U UG         U  U      G  G G G   AGG  G  GU
Stem-loop sequence	GGCACUCGACCUCGUGGUCGAGUGAUGUGAUCGAGUGAUGGUUUGGUGAUGGAGAUGAGGGCAGUCGACCUCGUGGUCGAGUGGU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
NM_103391.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   |||||||||||||||||||| targets:1150   CCACUCGACCACGAGGUCGA   1169 Target Full Sequence	0.0	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   |||||||||||||||||||| targets:1526   CCACUCGACCACGAGGUCGA   1545 Target Full Sequence	0.0	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
NM_103391.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   *|||||||||*||||||||| targets:1059   GCACUCGACCCCGAGGUCGA   1078 Target Full Sequence	1.5	Arabidopsis thaliana DNAse I-like superfamily protein partial mRNA	DNAse I-like superfamily protein(AT1G40390)	coding protein	psRNATarget
EF183042.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   =|||||||||*||||||||| targets:1617   UCACUCGACCCCGAGGUCGA   1636 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   =||||||||||=|||||||| targets:516   UCACUCGACCAUGAGGUCGA   535 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183194.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   ||||||||||||*||||||| targets:449   CCACUCGACCACCAGGUCGA   468 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   *||||||||||||=|||||| targets:1923   GCACUCGACCACGGGGUCGA   1942 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   *|||||||||*||||||||| targets:1864   GCACUCGACCUCGAGGUCGA   1883 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
AY227642.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   ||||||||||*||||||||| targets:854   CCACUCGACCCCGAGGUCGA   873 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g13400/F14O4.3) mRNA, complete cds	NA	coding protein	psRNATarget
EF183194.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   =|||||*||||*|||||||| targets:575   UCACUCUACCAAGAGGUCGA   594 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2339 unknown mRNA sequence	NA	coding protein	psRNATarget
DQ069808.1	ncRNA:20   GGUGAGCUGGUGCUCCAGCU   1   ||||||*|||||*||||||| targets:44   CCACUCAACCACAAGGUCGA   63 Target Full Sequence	2.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget