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BaseInfo

ncRNA ID	novel_zma_miR7324
Species	Zea mays
Class	miRNA
Genome position	Chr5:4987700-4987778 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	1 - CACAAUCUGCCUAACCUUAGUCGC - 24
Stem-loop(if miRNA)	--      C        C  AG   -  UUAA    AAAA   CACAAU UGCCUAAC UU  UCG CU    UUGA    C   |||||| |||||||| ||  ||| ||    ||||    U   GUGUUG AUGGAUUG AA  GGC GA    AAUU    A CC      C        A  -G   U  UUCG    CUUA
Stem-loop sequence	CACAAUCUGCCUAACCUUAGUCGCUUUAAUUGAAAAACUAAUUCUUAAGCUUAGUCGGGAAAGUUAGGUACGUUGUGCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT041551.2	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |||*|||||||||||||||||||| targets:1000   GCGCCUAAGGUUAGGCAGAUUGUG   1023 Target Full Sequence	0.0	Zea mays full-length cDNA clone ZM_BFb0002H08 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020550009.1	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |||*|||||||||||||||||||* targets:3721   GCGCCUAAGGUUAGGCAGAUUGUA   3744 Target Full Sequence	1.0	PREDICTED: Zea mays GTP binding (LOC101202714), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008675272.2	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |||*|||||||||||||||||||* targets:3840   GCGCCUAAGGUUAGGCAGAUUGUA   3863 Target Full Sequence	1.0	PREDICTED: Zea mays GTP binding (LOC101202714), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT069754.1	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |*||-|=||*|||||||||||||* targets:706   GGGA-UGAGAUUAGGCAGAUUGUC   728 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0278I19 mRNA, complete cds	NA	coding protein	psRNATarget
BT042434.1	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |*||-|=||*|||||||||||||* targets:609   GGGA-UGAGAUUAGGCAGAUUGUC   631 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0232F03 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001148518.1	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |*||-|=||*|||||||||||||* targets:609   GGGA-UGAGAUUAGGCAGAUUGUC   631 Target Full Sequence	3.0	Zea mays Cyclin/Brf1-like TBP-binding protein (LOC100274140), mRNA	NA	coding protein	psRNATarget
NM_001346889.1	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |*||-|=||*|||||||||||||* targets:726   GGGA-UGAGAUUAGGCAGAUUGUC   748 Target Full Sequence	3.0	Zea mays transcription factor IIIB 90 kDa subunit-like (LOC103635274), mRNA	NA	coding protein	psRNATarget
XM_008657761.2	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |*||-|=||*|||||||||||||* targets:723   GGGA-UGAGAUUAGGCAGAUUGUC   745 Target Full Sequence	3.0	PREDICTED: Zea mays transcription factor IIIB 90 kDa subunit-like (LOC103635274), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008657762.2	ncRNA:24   CGCUGAUUCCAAUCCGUCUAACAC   1   |*||-|=||*|||||||||||||* targets:762   GGGA-UGAGAUUAGGCAGAUUGUC   784 Target Full Sequence	3.0	PREDICTED: Zea mays transcription factor IIIB 90 kDa subunit-like (LOC103635274), transcript variant X2, mRNA	NA	coding protein	psRNATarget