Search result

BaseInfo

ncRNA ID novel_zma_miR7315
Species Zea mays
Class miRNA
Genome position Chr5:123892305-123892426 [-]
Reference genome RefGen_v4
Source SRR2647391;SRR2647467
Length 23
Mature sequence(if miRNA) 100 - CCGCCACUAGAAAUUGUAUUUCU - 122
Stem-loop(if miRNA) --                U    C   A   U        U           G        
  CCGCCACUAGAAAUUG AUUU UAG GGC GUUCCUUA GAAAACCGCCA UAGAAAUCC
  |||||||||||||||| |||| ||| ||| |||||||| ||||||||||| ||||||||A
  GGCGGUGAUCUUUAGC UAAA AUC CCG CAAGGAAU CUUUUGGCGGU AUCUUUAGU
UU                -    A   A   C        U           G        
Stem-loop sequence CCGCCACUAGAAAUUGUAUUUCUAGAGGCUGUUCCUUAUGAAAACCGCCAGUAGAAAUCCAUGAUUUCUAGUGGCGGUUUUCUUAAGGAACCGCCACUAAAAAUCGAUUUCUAGUGGCGGUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
JB163473.1
ncRNA:23   UCUUUAUGUUAAAGAUCACCGCC   1
  |*|||*|==||||||||||||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2559767 NA coding protein psRNATarget
LQ235142.1
ncRNA:23   UCUUUAUGUUAAAGAUCACCGCC   1
  |*|||*|==||||||||||||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2985353 NA coding protein psRNATarget
HI403012.1
ncRNA:23   UCUUUAUGUUAAAGAUCACCGCC   1
  |*|||*|==||||||||||||||
targets:1   AUAAAAAUGAUUUCUAGUGGCGG   23

3.0 Sequence 1137 from Patent EP2074227 NA coding protein psRNATarget