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BaseInfo

ncRNA ID novel_zma_miR7312
Species Zea mays
Class miRNA
Genome position Chr5:213565324-213565386 [-]
Reference genome RefGen_v4
Source SRR2647391
Length 21
Mature sequence(if miRNA) 43 - GCUCCAAUGGUCGACUGCGUC - 63
Stem-loop(if miRNA) -GC    A  -    A  GC   AGA    UAA
   UCCA UG GUCG CU  GUC   ACCC   U
   |||| || |||| ||  |||   ||||
   AGGU AC CGGU GG  CAG   UGGG   G
GAC    C  A    C  UA   ---    UUG
Stem-loop sequence GCUCCAAUGGUCGACUGCGUCAGAACCCUAAUGGUUGGGUGACAUGGCUGGCACACUGGACAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_020542442.1
ncRNA:21   CUGCGUCAGCUGGUAACCUCG   1
  |||||*|||||||||*|||||
targets:77   GACGCCGUCGACCAUCGGAGC   97

2.5 PREDICTED: Zea mays uncharacterized LOC103636436 (LOC103636436), transcript variant X3, mRNA NA coding protein psRNATarget
XM_008658791.1
ncRNA:21   CUGCGUCAGCUGGUAACCUCG   1
  |||||*|||||||||*|||||
targets:77   GACGCCGUCGACCAUCGGAGC   97

2.5 PREDICTED: Zea mays uncharacterized LOC103636436 (LOC103636436), transcript variant X1, mRNA NA coding protein psRNATarget