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BaseInfo

ncRNA ID	novel_zma_miR7306
Species	Zea mays
Class	miRNA
Genome position	Chr4:43881449-43881571 [+]
Reference genome	RefGen_v4
Source	SRR2647391
Length	24
Mature sequence(if miRNA)	1 - AGGGCUAGUUUGGAAACUCAAAUU - 24
Stem-loop(if miRNA)	--       G         -                    A   U   -----          A   AGGGCUA UUUGGAAAC UCAAAUUCCUUUCGGGAUUG AGG GAU     UGGAGAGGAA U   ||||||| ||||||||| |||||||||||||||||||| ||| |||     |||||||||| U   UUCCGAU AAAUCUUUG AGUUUAGGGGAAGCCCUAAC UCU CUA     ACCUUUUCUU A AA       G         G                    C   U   AUUCC          G
Stem-loop sequence	AGGGCUAGUUUGGAAACUCAAAUUCCUUUCGGGAUUGAAGGUGAUUGGAGAGGAAAUUAGUUCUUUUCCACCUUAAUCUUCUCCAAUCCCGAAGGGGAUUUGAGGUUUCUAAAGUAGCCUUAA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020550081.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||||||||||||||||||||=|| targets:2430   AAUUUGAGUUUCCAAACUAGCUCU   2453 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC109944788 (LOC109944788), mRNA	NA	coding protein	psRNATarget
XM_008679616.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||||||||||||||||||||| targets:1220   GAUUUGAGUUUCCAAACUAGCCCU   1243 Target Full Sequence	0.0	PREDICTED: Zea mays uncharacterized LOC103652675 (LOC103652675), mRNA	NA	coding protein	psRNATarget
EZ069159.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||||||||||||||||||||| targets:88   GAUUUGAGUUUCCAAACUAGCCCU   111 Target Full Sequence	0.0	TSA: Zea mays contig04794, mRNA sequence	NA	coding protein	psRNATarget
XM_008676335.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||||||||||||||||||=|| targets:4404   GAUUUGAGUUUCCAAACUAGCUCU   4427 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/arginine repetitive matrix protein 2 isoform 4 (LOC103650763), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008676333.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||||||||||||||||||=|| targets:4391   GAUUUGAGUUUCCAAACUAGCUCU   4414 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/arginine repetitive matrix protein 2 isoform 4 (LOC103650763), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008676336.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||||||||||||||||||=|| targets:4377   GAUUUGAGUUUCCAAACUAGCUCU   4400 Target Full Sequence	1.5	PREDICTED: Zea mays Serine/arginine repetitive matrix protein 2 isoform 4 (LOC103650763), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008671736.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||||||||=|||||||||||| targets:2517   GAUUUGAGUUUUCAAACUAGCCCU   2540 Target Full Sequence	1.5	PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA	NA	coding protein	psRNATarget
XM_008659899.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||||||||||=|||||||||| targets:2352   GAUUUGAGUUUCCGAACUAGCCCU   2375 Target Full Sequence	1.5	PREDICTED: Zea mays carotene epsilon-monooxygenase, chloroplastic (LOC103637620), mRNA	NA	coding protein	psRNATarget
XM_008676159.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*|||||||||||||||||| targets:2664   GAUUUAAGUUUCCAAACUAGCCCU   2687 Target Full Sequence	1.0	PREDICTED: Zea mays VIN3-like protein 1 (LOC103650592), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020550313.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*|||||||||||||||||| targets:2344   GAUUUAAGUUUCCAAACUAGCCCU   2367 Target Full Sequence	1.0	PREDICTED: Zea mays VIN3-like protein 1 (LOC103650592), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008660198.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||||=|*||||||||||||||| targets:1003   AAUUUGGGGUUCCAAACUAGCCCU   1026 Target Full Sequence	2.0	PREDICTED: Zea mays ER membrane protein complex subunit 7-like protein (LOC100277198), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT017648.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =|||||||||||||||||||||*| targets:309   GAUUUGAGUUUCCAAACUAGCCAU   332 Target Full Sequence	1.5	Zea mays clone EL01N0439D04.c mRNA sequence	NA	coding protein	psRNATarget
EZ069250.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||||=|*||||||||||||||| targets:156   AAUUUGGGGUUCCAAACUAGCCCU   179 Target Full Sequence	2.0	TSA: Zea mays contig04885, mRNA sequence	NA	coding protein	psRNATarget
EZ071161.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||||*||||||||||||||||=| targets:118   AAUUUAAGUUUCCAAACUAGCCUU   141 Target Full Sequence	2.5	TSA: Zea mays contig06798, mRNA sequence	NA	coding protein	psRNATarget
EU955577.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   *||*|||||||||||||||||||| targets:2116   UAUAUGAGUUUCCAAACUAGCCCU   2139 Target Full Sequence	0.0	Zea mays clone 1537616 kelch motif family protein mRNA, complete cds	NA	coding protein	psRNATarget
EU955577.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   **|*|||||||||||||||||||| targets:2157   UCUAUGAGUUUCCAAACUAGCCCU   2180 Target Full Sequence	0.0	Zea mays clone 1537616 kelch motif family protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154017.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   *||*|||||||||||||||||||| targets:2115   UAUAUGAGUUUCCAAACUAGCCCU   2138 Target Full Sequence	0.0	Zea mays kelch motif family protein (LOC100281098), mRNA	NA	coding protein	psRNATarget
NM_001154017.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   **|*|||||||||||||||||||| targets:2156   UCUAUGAGUUUCCAAACUAGCCCU   2179 Target Full Sequence	0.0	Zea mays kelch motif family protein (LOC100281098), mRNA	NA	coding protein	psRNATarget
EZ111591.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   *|||||||||||||||||||||*| targets:104   CAUUUGAGUUUCCAAACUAGCCAU   127 Target Full Sequence	1.5	TSA: Zea mays contig47252, mRNA sequence	NA	coding protein	psRNATarget
XM_020547541.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =|||||=|||||*||||||||||| targets:2046   GAUUUGGGUUUCGAAACUAGCCCU   2069 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020547541.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|=|||*||||||||||||| targets:1964   AAAUGGGGUUCCCAAACUAGCCCU   1987 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100273682 (LOC100273682), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020545649.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =|||||||*|||||=||||||||| targets:745   GAUUUGAGAUUCCAGACUAGCCCU   768 Target Full Sequence	2.5	PREDICTED: Zea mays zinc finger BED domain-containing protein DAYSLEEPER-like (LOC109942989), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008654469.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|||||*||||||||||||||| targets:3570   AAAUUGAGCUUCCAAACUAGCCCU   3593 Target Full Sequence	1.0	PREDICTED: Zea mays U-box domain-containing protein 35 (LOC103632728), mRNA	NA	coding protein	psRNATarget
NM_001150806.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|||||||*||||||||||||| targets:1055   AAAUUGAGUUCCCAAACUAGCCCU   1078 Target Full Sequence	1.0	Zea mays Tyrosine specific protein phosphatase-like (LOC100277156), mRNA	NA	coding protein	psRNATarget
EU967093.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|||||||*||||||||||||| targets:1005   AAAUUGAGUUCCCAAACUAGCCCU   1028 Target Full Sequence	1.0	Zea mays clone 299427 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
BT084259.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|||||||*||||||||||||| targets:1009   AAAUUGAGUUCCCAAACUAGCCCU   1032 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFb0094M03 mRNA, complete cds	NA	coding protein	psRNATarget
EU958754.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ***||||||||=|||||||||||| targets:912   CCGUUGAGUUUUCAAACUAGCCCU   935 Target Full Sequence	1.5	Zea mays clone 207771 60S ribosomal protein L23 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001154870.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ***||||||||=|||||||||||| targets:912   CCGUUGAGUUUUCAAACUAGCCCU   935 Target Full Sequence	1.5	Zea mays 60S ribosomal protein L23 (LOC100281952), mRNA	NA	coding protein	psRNATarget
XM_008666283.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ==**|||||||||||||||||||| targets:3391   GGGAUGAGUUUCCAAACUAGCCCU   3414 Target Full Sequence	0.0	PREDICTED: Zea mays protein indeterminate-domain 16 (LOC103643131), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_008666284.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ==**|||||||||||||||||||| targets:3308   GGGAUGAGUUUCCAAACUAGCCCU   3331 Target Full Sequence	0.0	PREDICTED: Zea mays protein indeterminate-domain 16 (LOC103643131), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008655231.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*||||||||||||||*||| targets:2857   GAUUUAAGUUUCCAAACUAGACCU   2880 Target Full Sequence	2.5	PREDICTED: Zea mays probable indole-3-acetic acid-amido synthetase GH3.11 (LOC103633549), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020541149.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*||||||||||||||*||| targets:2772   GAUUUAAGUUUCCAAACUAGACCU   2795 Target Full Sequence	2.5	PREDICTED: Zea mays probable indole-3-acetic acid-amido synthetase GH3.11 (LOC103633549), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020541150.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*||||||||||||||*||| targets:2756   GAUUUAAGUUUCCAAACUAGACCU   2779 Target Full Sequence	2.5	PREDICTED: Zea mays probable indole-3-acetic acid-amido synthetase GH3.11 (LOC103633549), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020541151.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*||||||||||||||*||| targets:2716   GAUUUAAGUUUCCAAACUAGACCU   2739 Target Full Sequence	2.5	PREDICTED: Zea mays probable indole-3-acetic acid-amido synthetase GH3.11 (LOC103633549), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020541153.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*||||||||||||||*||| targets:2637   GAUUUAAGUUUCCAAACUAGACCU   2660 Target Full Sequence	2.5	PREDICTED: Zea mays probable indole-3-acetic acid-amido synthetase GH3.11 (LOC103633549), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020541152.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||||*||||||||||||||*||| targets:2631   GAUUUAAGUUUCCAAACUAGACCU   2654 Target Full Sequence	2.5	PREDICTED: Zea mays probable indole-3-acetic acid-amido synthetase GH3.11 (LOC103633549), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_020544094.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|=||||||||||||||||| targets:1306   AAAUAGGGUUUCCAAACUAGCCCU   1329 Target Full Sequence	1.0	PREDICTED: Zea mays 3-ketoacyl-CoA synthase 6 (LOC103638222), mRNA	NA	coding protein	psRNATarget
XM_008674763.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:1333   AAUUGGAGUUGCUAAACUAGCCCU   1356 Target Full Sequence	2.5	PREDICTED: Zea mays stress regulated protein (LOC100284893), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT064672.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:1344   AAUUGGAGUUGCUAAACUAGCCCU   1367 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0008O01 mRNA, complete cds	NA	coding protein	psRNATarget
EU970039.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:1238   AAUUGGAGUUGCUAAACUAGCCCU   1261 Target Full Sequence	2.5	Zea mays clone 338909 stress regulated protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001157788.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:1237   AAUUGGAGUUGCUAAACUAGCCCU   1260 Target Full Sequence	2.5	Zea mays stress regulated protein (LOC100284893), mRNA	NA	coding protein	psRNATarget
BT037070.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:1225   AAUUGGAGUUGCUAAACUAGCCCU   1248 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0153L10 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008674764.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:1143   AAUUGGAGUUGCUAAACUAGCCCU   1166 Target Full Sequence	2.5	PREDICTED: Zea mays stress regulated protein (LOC100284893), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT065169.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:1140   AAUUGGAGUUGCUAAACUAGCCCU   1163 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0015J15 mRNA, complete cds	NA	coding protein	psRNATarget
EU967323.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|||=|*||||||||||||||| targets:970   AAAUUGGGGUUCCAAACUAGCCCU   993 Target Full Sequence	2.0	Zea mays clone 301481 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001150835.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|||=|*||||||||||||||| targets:970   AAAUUGGGGUUCCAAACUAGCCCU   993 Target Full Sequence	2.0	Zea mays ER membrane protein complex subunit 7-like protein (LOC100277198), mRNA	NA	coding protein	psRNATarget
EU951374.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|=||||||||||||||||| targets:414   AAAUGGGGUUUCCAAACUAGCCCU   437 Target Full Sequence	1.0	Zea mays clone 697858 mRNA sequence	NA	coding protein	psRNATarget
EZ112868.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|||||*|=||||||||||| targets:150   AAUUGGAGUUGCUAAACUAGCCCU   173 Target Full Sequence	2.5	TSA: Zea mays contig48529, mRNA sequence	NA	coding protein	psRNATarget
LQ239236.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||*|*|||||||||||||||||| targets:93   GAUGUAAGUUUCCAAACUAGCCCU   116 Target Full Sequence	1.0	Sequence 5231 from Patent EP2985353	NA	coding protein	psRNATarget
JB167567.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||*|*|||||||||||||||||| targets:93   GAUGUAAGUUUCCAAACUAGCCCU   116 Target Full Sequence	1.0	Sequence 5231 from Patent EP2559767	NA	coding protein	psRNATarget
HI407106.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =||*|*|||||||||||||||||| targets:93   GAUGUAAGUUUCCAAACUAGCCCU   116 Target Full Sequence	1.0	Sequence 5231 from Patent EP2074227	NA	coding protein	psRNATarget
EZ068772.1	ncRNA:24   UUAAACUCA---AAGGUUUGAUCGGGA   1   |=||*||||---||||||||||||||| targets:44   AGUUAGAGUGGUUUCCAAACUAGCCCU   70 Target Full Sequence	3.0	TSA: Zea mays contig04407, mRNA sequence	NA	coding protein	psRNATarget
EU957492.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|=|||*||||||||||||* targets:1779   AAUUGGGGUUCCCAAACUAGCCCK   1802 Target Full Sequence	3.0	Zea mays clone 1594874 mRNA sequence	NA	coding protein	psRNATarget
XM_020543502.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   =|||*|||||||||*||||||||* targets:1800   GAUUCGAGUUUCCAUACUAGCCCG   1823 Target Full Sequence	2.5	PREDICTED: Zea mays putative ubiquitin-conjugating enzyme family (LOC100194405), transcript variant X1, mRNA	NA	coding protein	psRNATarget
NM_001350811.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*||||||||||||| targets:2559   AAAUGGAGUUCCCAAACUAGCCCU   2582 Target Full Sequence	1.0	Zea mays uncharacterized LOC100278071 (LOC100278071), mRNA	NA	coding protein	psRNATarget
XM_020552563.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*||||||||||||| targets:455   AAAUGGAGUUCCCAAACUAGCCCU   478 Target Full Sequence	1.0	PREDICTED: Zea mays probable alpha,alpha-trehalose-phosphate synthase [UDP-forming] 10 (LOC103653427), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT053999.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*||||*|||||||||||||| targets:1177   AAAUGGAGUCUCCAAACUAGCCCU   1200 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0109O10 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001152323.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*||||*|||||||||||||| targets:1177   AAAUGGAGUCUCCAAACUAGCCCU   1200 Target Full Sequence	1.0	Zea mays uncharacterized LOC100279302 (LOC100279302), mRNA	NA	coding protein	psRNATarget
XM_008669712.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||||||||||||*||| targets:2199   AAAUAGAGUUUCCAAACUAGGCCU   2222 Target Full Sequence	1.5	PREDICTED: Zea mays DHHC zinc finger domain containing protein (LOC100281605), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008665186.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|*|||*||||||||||||| targets:2   AAUUAGUGUUCCCAAACUAGCCCU   25 Target Full Sequence	2.0	PREDICTED: Zea mays probable galacturonosyltransferase-like 3 (LOC103641870), mRNA	NA	coding protein	psRNATarget
NM_001154524.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||||||||||||*||| targets:1970   AAAUAGAGUUUCCAAACUAGGCCU   1993 Target Full Sequence	1.5	Zea mays DHHC zinc finger domain containing protein (LOC100281605), mRNA	NA	coding protein	psRNATarget
EU957224.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||||||||||||*||| targets:1970   AAAUAGAGUUUCCAAACUAGGCCU   1993 Target Full Sequence	1.5	Zea mays clone 1586117 DHHC zinc finger domain containing protein mRNA, complete cds	NA	coding protein	psRNATarget
XM_020544941.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|*|||*||||||||||||| targets:1644   AAUUAGUGUUCCCAAACUAGCCCU   1667 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020544939.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|*|||*||||||||||||| targets:1558   AAUUAGUGUUCCCAAACUAGCCCU   1581 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020544940.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|*|||*||||||||||||| targets:1515   AAUUAGUGUUCCCAAACUAGCCCU   1538 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020544942.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|*|||*||||||||||||| targets:1514   AAUUAGUGUUCCCAAACUAGCCCU   1537 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020544943.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||||*|*|||*||||||||||||| targets:1471   AAUUAGUGUUCCCAAACUAGCCCU   1494 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC100273625 (IDP475), transcript variant X5, mRNA	NA	coding protein	psRNATarget
BT065747.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*||||*|||||||||||||| targets:7   AAAUGGAGUCUCCAAACUAGCCCU   30 Target Full Sequence	1.0	Zea mays full-length cDNA clone ZM_BFc0062G24 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008662239.2	ncRNA:24   UUAAACUC-AAAGGUUUGAUCGGGA   1   |||--|=|-|||||||||||||||| targets:1909   AAU--GGGAUUUCCAAACUAGCCCU   1931 Target Full Sequence	3.0	PREDICTED: Zea mays probable mitochondrial adenine nucleotide transporter BTL3 (LOC103639491), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020544055.1	ncRNA:24   UUAAACUC-AAAGGUUUGAUCGGGA   1   |||--|=|-|||||||||||||||| targets:1889   AAU--GGGAUUUCCAAACUAGCCCU   1911 Target Full Sequence	3.0	PREDICTED: Zea mays probable mitochondrial adenine nucleotide transporter BTL3 (LOC103639491), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020545615.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_020545618.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X13, mRNA	NA	coding protein	psRNATarget
XM_020545620.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X15, mRNA	NA	coding protein	psRNATarget
XM_020545606.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X1, mRNA	NA	coding protein	psRNATarget
XM_020545616.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X11, mRNA	NA	coding protein	psRNATarget
XM_020545607.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020545619.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X14, mRNA	NA	coding protein	psRNATarget
XM_020545609.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_020545617.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X12, mRNA	NA	coding protein	psRNATarget
XM_020545608.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020545610.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:465   AAAUGGAGUUCCCAAACUAGUCCU   488 Target Full Sequence	2.5	PREDICTED: Zea mays filament-like plant protein 7 (LOC103642994), transcript variant X5, mRNA	NA	coding protein	psRNATarget
XM_008660641.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:3185   AAAUGGAGUUCCCAAACUAGUCCU   3208 Target Full Sequence	2.5	PREDICTED: Zea mays putative coatomer beta subunit family protein (LOC100383405), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020547422.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:2346   AAAUAGAGUUCCCAAACUAGUCCU   2369 Target Full Sequence	2.5	PREDICTED: Zea mays 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (LOC100193732), transcript variant X6, mRNA	NA	coding protein	psRNATarget
XM_020545752.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||--|||||*||||||||||=|| targets:2288   AAU--GAGUUGCCAAACUAGCUCU   2309 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100274490 (LOC100274490), transcript variant X9, mRNA	NA	coding protein	psRNATarget
BT067132.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:1246   AAAUGGAGUUCCCAAACUAGUCCU   1269 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0204M05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001176059.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:1246   AAAUGGAGUUCCCAAACUAGUCCU   1269 Target Full Sequence	2.5	Zea mays putative coatomer beta subunit family protein (LOC100383405), mRNA	NA	coding protein	psRNATarget
XM_008665040.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||--|||||*||||||||||=|| targets:1667   AAU--GAGUUGCCAAACUAGCUCU   1688 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100274490 (LOC100274490), transcript variant X8, mRNA	NA	coding protein	psRNATarget
XM_008652587.2	ncRNA:24   UUAAACUC-AAAGGUUUGAUCGGGA   1   |||--|||-|||||||||||||||* targets:1078   AAU--GAGGUUUCCAAACUAGCCCC   1100 Target Full Sequence	3.0	PREDICTED: Zea mays Chaperone DnaJ-domain superfamily protein (LOC100191793), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT036076.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   ||*|*|||||*|||||||||=||| targets:867   AAAUAGAGUUCCCAAACUAGUCCU   890 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0094C03 mRNA, complete cds	NA	coding protein	psRNATarget
BT034002.1	ncRNA:24   UUAAACUC-AAAGGUUUGAUCGGGA   1   |||--|||-|||||||||||||||* targets:1018   AAU--GAGGUUUCCAAACUAGCCCC   1040 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0044B05 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001137218.1	ncRNA:24   UUAAACUC-AAAGGUUUGAUCGGGA   1   |||--|||-|||||||||||||||* targets:1018   AAU--GAGGUUUCCAAACUAGCCCC   1040 Target Full Sequence	3.0	Zea mays Chaperone DnaJ-domain superfamily protein (LOC100191793), mRNA	NA	coding protein	psRNATarget
XM_008652589.2	ncRNA:24   UUAAACUC-AAAGGUUUGAUCGGGA   1   |||--|||-|||||||||||||||* targets:1000   AAU--GAGGUUUCCAAACUAGCCCC   1022 Target Full Sequence	3.0	PREDICTED: Zea mays Chaperone DnaJ-domain superfamily protein (LOC100191793), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008652590.2	ncRNA:24   UUAAACUC-AAAGGUUUGAUCGGGA   1   |||--|||-|||||||||||||||* targets:973   AAU--GAGGUUUCCAAACUAGCCCC   995 Target Full Sequence	3.0	PREDICTED: Zea mays Chaperone DnaJ-domain superfamily protein (LOC100191793), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008665038.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||--|||||*||||||||||=|| targets:975   AAU--GAGUUGCCAAACUAGCUCU   996 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100274490 (LOC100274490), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008665037.2	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||--|||||*||||||||||=|| targets:973   AAU--GAGUUGCCAAACUAGCUCU   994 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100274490 (LOC100274490), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_020545753.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||--|||||*||||||||||=|| targets:968   AAU--GAGUUGCCAAACUAGCUCU   989 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100274490 (LOC100274490), transcript variant X10, mRNA	NA	coding protein	psRNATarget
XM_020545979.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||--|||||*||||||||||=|| targets:711   AAU--GAGUUGCCAAACUAGCUCU   732 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100303977 (LOC100303977), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_020545978.1	ncRNA:24   UUAAACUCAAAGGUUUGAUCGGGA   1   |||--|||||*||||||||||=|| targets:710   AAU--GAGUUGCCAAACUAGCUCU   731 Target Full Sequence	2.5	PREDICTED: Zea mays uncharacterized LOC100303977 (LOC100303977), transcript variant X2, mRNA	NA	coding protein	psRNATarget
BT062985.1	ncRNA:24   UUAA----ACUCAAAGGUUUGAUCGGGA   1   ||||----|*=|||*||||||||||||| targets:1784   AAUUAACCUUGGUUGCCAAACUAGCCCU   1811 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0014B20 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001174812.1	ncRNA:24   UUAA----ACUCAAAGGUUUGAUCGGGA   1   ||||----|*=|||*||||||||||||| targets:1784   AAUUAACCUUGGUUGCCAAACUAGCCCU   1811 Target Full Sequence	3.0	Zea mays uncharacterized LOC100382047 (LOC100382047), mRNA	NA	coding protein	psRNATarget
BT041461.1	ncRNA:24   UUAA----ACUCAAAGGUUUGAUCGGGA   1   ||||----|*=|||*||||||||||||| targets:1138   AAUUAACCUUGGUUGCCAAACUAGCCCU   1165 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFc0061G19 mRNA, complete cds	NA	coding protein	psRNATarget
BT042196.1	ncRNA:24   UUAA----ACUCAAAGGUUUGAUCGGGA   1   ||||----|*=|||*||||||||||||| targets:1104   AAUUAACCUUGGUUGCCAAACUAGCCCU   1131 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0158O11 mRNA, complete cds	NA	coding protein	psRNATarget
BT037168.1	ncRNA:24   UUAA----ACUCAAAGGUUUGAUCGGGA   1   ||||----|*=|||*||||||||||||| targets:1038   AAUUAACCUUGGUUGCCAAACUAGCCCU   1065 Target Full Sequence	3.0	Zea mays full-length cDNA clone ZM_BFb0157D23 mRNA, complete cds	NA	coding protein	psRNATarget