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BaseInfo

ncRNA ID novel_zma_miR7285
Species Zea mays
Class miRNA
Genome position Chr4:186308838-186308924 [+]
Reference genome RefGen_v4
Source SRR2647391
Length 24
Mature sequence(if miRNA) 64 - UCAUUCUCUUGAUUGUAAAGCGAG - 87
Stem-loop(if miRNA) --  A   G      UG    UUG   -- UU UUACGUUCUUGAU
  CG CUU UGCAAU  AGAG   CGA  G  C             U
  || ||| ||||||  ||||   |||  |  |
  GC GAA AUGUUA  UCUC   CUC  U  A             C
GA  -   -      GU    UUA   CU -C UUCUUAUAUUGAG
Stem-loop sequence CGACUUGUGCAAUUGAGAGUUGCGAGUUCUUACGUUCUUGAUUCGAGUUAUAUUCUUACUUCCUCAUUCUCUUGAUUGUAAAGCGAG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
NM_001351848.1
ncRNA:24   GA-GCGAAAUGUUAGUUCUCUUACU   1
  ||-=||||**||||||||||||||*
targets:1607   CUGUGCUUGCCAAUCAAGAGAAUGU   1631

3.0 Zea mays (LOC110366356), mRNA NA coding protein psRNATarget