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BaseInfo

ncRNA ID osa-miRf10323-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - CUGAUACCUGAUAGGUAUCAC - NA
Stem-loop(if miRNA) --AUC  C        UA         C     A  U    A  A  A
     GU UGAUACCU  CAGGUAUCA AUGAU CU UGCA GU UC C
     || ||||||||  ||||||||| ||||| || |||| || ||
     CA ACUAUGGA  GUCCAUAGU UGCUA GA GUGU CA AG C
UAGUC  C        UA         C     A  U    G  A  U
Stem-loop sequence AUCGUCUGAUACCUUACAGGUAUCACAUGAUACUUUGCAAGUAUCACCUGAAACGUGUGUAGAAUCGUCUGAUACCUGAUAGGUAUCACACCUGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
HI403788.1
ncRNA:21   CACUAUGGAUAGUCCAUAGUC   1
  ||||||||||||||||||||*
targets:36   GUGAUACCUAUCAGGUAUCAU   56

1.0 Sequence 1913 from Patent EP2074227 NA coding protein psRNATarget
JB164249.1
ncRNA:21   CACUAUGGAUAGUCCAUAGUC   1
  ||||||||||||||||||||*
targets:36   GUGAUACCUAUCAGGUAUCAU   56

1.0 Sequence 1913 from Patent EP2559767 NA coding protein psRNATarget
LQ235918.1
ncRNA:21   CACUAUGGAUAGUCCAUAGUC   1
  ||||||||||||||||||||*
targets:36   GUGAUACCUAUCAGGUAUCAU   56

1.0 Sequence 1913 from Patent EP2985353 NA coding protein psRNATarget
JB164190.1
ncRNA:21   CACUAUGGAUAGUCCAUAGUC   1
  |||=|||=|||||||||||||
targets:44   GUGGUACUUAUCAGGUAUCAG   64

2.0 Sequence 1854 from Patent EP2559767 NA coding protein psRNATarget
HI403729.1
ncRNA:21   CACUAUGGAUAGUCCAUAGUC   1
  |||=|||=|||||||||||||
targets:44   GUGGUACUUAUCAGGUAUCAG   64

2.0 Sequence 1854 from Patent EP2074227 NA coding protein psRNATarget
LQ235859.1
ncRNA:21   CACUAUGGAUAGUCCAUAGUC   1
  |||=|||=|||||||||||||
targets:44   GUGGUACUUAUCAGGUAUCAG   64

2.0 Sequence 1854 from Patent EP2985353 NA coding protein psRNATarget
XM_015770784.1
ncRNA:21   CACUAUGGAUAGUCCAUAGUC   1
  *|||||=|||||||||||||*
targets:2073   AUGAUAUCUAUCAGGUAUCAU   2093

2.0 PREDICTED: Oryza sativa Japonica Group glycerol-3-phosphate 2-O-acyltransferase 6 (LOC4328061), mRNA glycerol-3-phosphate 2-O-acyltransferase 6(LOC4328061) coding protein psRNATarget