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BaseInfo

ncRNA ID	novel_zma_miR7226
Species	Zea mays
Class	miRNA
Genome position	Chr2:208403587-208403682 [+]
Reference genome	RefGen_v4
Source	SRR2647390
Length	24
Mature sequence(if miRNA)	73 - AUUCCCCUCAAUCUAUAUGGAUUG - 96
Stem-loop(if miRNA)	--              GA         UACGGAUU     AGA   UG -   A   AUCCAUAUGGAUUG  GGGGAUUGA        GGGGG   UUU  A CUU U   ||||||||||||||  |||||||||        |||||   |||  | |||   UAGGUAUAUCUAAC  CCCUUAACU        CCCCC   AAA  U GGG U GU              UC         --------     ---   GU A   A
Stem-loop sequence	AUCCAUAUGGAUUGGAGGGGAUUGAUACGGAUUGGGGGAGAUUUUGACUUAUUAGGGAUUGAAACCCCCUCAAUUCCCCUCAAUCUAUAUGGAUUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_008658561.2	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   |||||||||||||||||||||=|| targets:230   CAAUCCAUAUAGAUUGAGGGGGAU   253 Target Full Sequence	1.5	PREDICTED: Zea mays mitogen-activated protein kinase kinase kinase 2 (LOC103636208), mRNA	NA	coding protein	psRNATarget
EU956568.1	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   ||||||||||=||||||||||=|| targets:1559   CAAUCCAUAUGGAUUGAGGGGGAU   1582 Target Full Sequence	2.5	Zea mays clone 1566799 mRNA sequence	NA	coding protein	psRNATarget
BT055467.1	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   ||||||||||=||||||||||=|| targets:1014   CAAUCCAUAUGGAUUGAGGGGGAU   1037 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0279E03 mRNA, complete cds	NA	coding protein	psRNATarget
XM_020548080.1	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   ||||||||||=||||||||||=|| targets:976   CAAUCCAUAUGGAUUGAGGGGGAU   999 Target Full Sequence	2.5	PREDICTED: Zea mays translation initiation factor IF-2-like (LOC109943947), mRNA	NA	coding protein	psRNATarget
EU972046.1	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   ||||||||||=||||||||||=|| targets:713   CAAUCCAUAUGGAUUGAGGGGGAU   736 Target Full Sequence	2.5	Zea mays clone 373861 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
NM_001348011.1	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   ||||||||||=||||||||||=|| targets:374   CAAUCCAUAUGGAUUGAGGGGGAU   397 Target Full Sequence	2.5	Zea mays hypothetical protein (LOC100277538), mRNA	NA	coding protein	psRNATarget
BT055069.1	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   ||||||||||=|||||||||||*| targets:906   CAAUCCAUAUGGAUUGAGGGGAUU   929 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0132H13 mRNA, complete cds	NA	coding protein	psRNATarget
NM_001111600.2	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   =|||||||||*||||||||*|||| targets:2854   UAAUCCAUAUCGAUUGAGGUGAAU   2877 Target Full Sequence	2.5	Zea mays origin recognition complex 1 (orc1), mRNA	NA	coding protein	psRNATarget
EU970866.1	ncRNA:24   GUUAGGUAUAUCUAACUCCCCUUA   1   =|||||||||*||||||||*|||| targets:2831   UAAUCCAUAUCGAUUGAGGUGAAU   2854 Target Full Sequence	2.5	Zea mays clone 352587 mRNA sequence	NA	coding protein	psRNATarget