ncRNA ID | novel_zma_miR7224 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr2:152741147-152741294 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647390 |
Length | 24 |
Mature sequence(if miRNA) | 1 - UUUUAAAUCUGGGACAUCCAUCUC - 24 |
Stem-loop(if miRNA) |
--               A  C    C     C     C    G       GAUU       ------------      A   UUUUAAAUCUGGGAC UC AUCU ACAUC AGCGG AGCA UUAAUUU    AAGAACC            CCUCCC C   ||||||||||||||| || |||| ||||| ||||| |||| |||||||    |||||||            |||||| C   AAAAUUUAGAUCUUG AG UAGG UGUAG UUGUC UCGU GGUUGAA    UUCUUGG            GGAGGG A GU               C  U    U     U     U    -       AUAU       AAUAAAGUGGAA      A |
Stem-loop sequence | UUUUAAAUCUGGGACAUCCAUCUCACAUCCAGCGGCAGCAGUUAAUUUGAUUAAGAACCCCUCCCACCAAGGGAGGAAGGUGAAAUAAGGUUCUUUAUAAAGUUGGUGCUUCUGUUUGAUGUUGGAUUGACGUUCUAGAUUUAAAAUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008646380.2 |
|
2.5 | PREDICTED: Zea mays E3 ubiquitin-protein ligase UPL7 (LOC103625986), transcript variant X2, mRNA | NA | coding protein | psRNATarget | |||||||||
XM_020537973.1 |
|
1.5 | PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM22-4-like (LOC109939669), mRNA | NA | coding protein | psRNATarget |