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BaseInfo

ncRNA ID novel_zma_miR7224
Species Zea mays
Class miRNA
Genome position Chr2:152741147-152741294 [+]
Reference genome RefGen_v4
Source SRR2647390
Length 24
Mature sequence(if miRNA) 1 - UUUUAAAUCUGGGACAUCCAUCUC - 24
Stem-loop(if miRNA) --               A  C    C     C     C    G       GAUU       ------------      A
  UUUUAAAUCUGGGAC UC AUCU ACAUC AGCGG AGCA UUAAUUU    AAGAACC            CCUCCC C
  ||||||||||||||| || |||| ||||| ||||| |||| |||||||    |||||||            |||||| C
  AAAAUUUAGAUCUUG AG UAGG UGUAG UUGUC UCGU GGUUGAA    UUCUUGG            GGAGGG A
GU               C  U    U     U     U    -       AUAU       AAUAAAGUGGAA      A
Stem-loop sequence UUUUAAAUCUGGGACAUCCAUCUCACAUCCAGCGGCAGCAGUUAAUUUGAUUAAGAACCCCUCCCACCAAGGGAGGAAGGUGAAAUAAGGUUCUUUAUAAAGUUGGUGCUUCUGUUUGAUGUUGGAUUGACGUUCUAGAUUUAAAAUG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008646380.2
ncRNA:24   CUCUACCUACAGGGUCUAAAUUUU   1
  ||||||*||||||=||||||||||
targets:804   GAGAUGAAUGUCCUAGAUUUAAAA   827

2.5 PREDICTED: Zea mays E3 ubiquitin-protein ligase UPL7 (LOC103625986), transcript variant X2, mRNA NA coding protein psRNATarget
XM_020537973.1
ncRNA:21   UACCUACAGGGUCUAAAUUUU   1
  ||||||||=||||||||||||
targets:1   AUGGAUGUUCCAGAUUUAAAA   21

1.5 PREDICTED: Zea mays mitochondrial import inner membrane translocase subunit TIM22-4-like (LOC109939669), mRNA NA coding protein psRNATarget