ncRNA ID | osa-miRf10316-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 22 |
Mature sequence(if miRNA) | NA - CGAGUAGUCCUUCGUAUUCUGC - NA |
Stem-loop(if miRNA) |
   UU     AG    -UU    A     --   -UUA    ACU       UUUGU    --CU    -U        - -      U GAC  CUGCA  GUAC   GGAU ACUCG  GGG    GAGC   UGUAGUC     GUAC    GGUU  GCGACUAG C UCAGAG C |||  |||||  ||||   |||| |||||  |||    ||||   |||||||     ||||    ||||  |||||||| | |||||| UUG  GACGU  UAUG   CCUG UGAGC  CCC    CUCG   ACGUCGG     CGUG    CCGG  UGCUGAUU G AGUUUC C    -U     CU    CUU    A     GG   UAUG    ---       -----    AACC    UU        A C      C |
Stem-loop sequence | GACUUCUGCAAGGUACUUGGAUAACUCGGGGUUAGAGCACUUGUAGUCUUUGUGUACCUGGUUUGCGACUAGCUCAGAGUCCCCUUUGACGAUUAGUCGUUUGGCCCCAAGUGCGGCUGCAGCUCGUAUCCCGGCGAGUAGUCCUUCGUAUUCUGCAGUGUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288702.1 |
|
0.0 | Oryza sativa Japonica Group cDNA, clone: J090061F15, full insert sequence | NA | coding protein | psRNATarget |