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BaseInfo

ncRNA ID osa-miRf10311-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - AAGCUCCUCUAAACAGGCCC - NA
Stem-loop(if miRNA)       -  -A                C     A   GA      A
AAAGCU GG  CUGUUUGGGGGAGCUU UAGCA CUG  GAUUUU C
|||||| ||  |||||||||||||||| ||||| |||  ||||||
UUUUGA CC  GACAAAUCUCCUCGAA AUUGU GAC  UUGAAG G
      G  CG                A     C   -G      A
Stem-loop sequence AAAGCUGGACUGUUUGGGGGAGCUUCUAGCAACUGGAGAUUUUACGAGAAGUUGCAGCUGUUAAAAGCUCCUCUAAACAGGCCCGAGUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK288770.1
ncRNA:20   CCCGGACAAAUCUCCUCGAA   1
  ||||||||||=|||||||||
targets:1717   GGGCCUGUUUGGAGGAGCUU   1736

1.5 Oryza sativa Japonica Group cDNA, clone: J090067O18, full insert sequence NA coding protein psRNATarget
AK067908.1
ncRNA:20   CCCGGACAAAUCUCCUCGAA   1
  |||=||||||||=|||||||
targets:1704   GGGUCUGUUUAGGGGAGCUU   1723

2.5 Oryza sativa Japonica Group cDNA clone:J013126N07, full insert sequence NA coding protein psRNATarget
CT829512.1
ncRNA:20   CCCGGACAAAUCUCCUCGAA   1
  |||=||||||||=|||||||
targets:1691   GGGUCUGUUUAGGGGAGCUU   1710

2.5 Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN044G15, full insert sequence NA coding protein psRNATarget
XM_015795749.1
ncRNA:20   CCCGGACAAAUCUCCUCGAA   1
  |||=||||||||=|||||||
targets:1851   GGGUCUGUUUAGGGGAGCUU   1870

2.5 PREDICTED: Oryza sativa Japonica Group hexose carrier protein HEX6 (LOC4346567), mRNA hexose carrier protein HEX6(LOC4346567) coding protein psRNATarget