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BaseInfo

ncRNA ID osa-miRf10304-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 22
Mature sequence(if miRNA) NA - GUCGCGAACUUGACGUCGUGCG - NA
Stem-loop(if miRNA)    -  C    -       GA           -UU  -U AACUCCCUGCAG
GGC CG GUCG CGAACUU  CGUCGUGCGUC   GG  G            G
||| || |||| |||||||  |||||||||||   ||  |            C
CCG GU UAGC GCUUGAG  GCAGCGCGCAG   CG  G            G
   A  -    C       GC           CAG  GA CAGGUGGCUGCG
Stem-loop sequence GGCCGCGUCGCGAACUUGACGUCGUGCGUCUUGGUGAACUCCCUGCAGGCGGCGUCGGUGGACGAGGCGACGACGCGCGACGCGGAGUUCGCCGAUUGAGCC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015769389.1
ncRNA:22   GCGUGCUGCAGUUCAAGCGCUG   1
  ||||||||*|||||||||||*|
targets:322   CGCACGACAUCAAGUUCGCGUC   343

2.5 PREDICTED: Oryza sativa Japonica Group germacrene A oxidase (LOC4328536), mRNA germacrene A oxidase(LOC4328536) coding protein psRNATarget
AK241581.1
ncRNA:22   GCGUGCUGCAGUUCAAGCGCUG   1
  ||||||||*|||||||||||*|
targets:207   CGCACGACAUCAAGUUCGCGUC   228

2.5 Oryza sativa Japonica Group cDNA, clone: J065181K09, full insert sequence NA coding protein psRNATarget