ncRNA ID | osa-miRf10297-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - CAAUGUCGUUGGCGCCGAGGA - NA |
Stem-loop(if miRNA) |
   --A   UA                        AC     A G   A UUAAAAGAAUAUAUUUGUAGCAGA GGG   UGG  CCAAUGUCGUUGGCGCCGAGGACC  UUUGU A AAA A                        A |||   |||  ||||||||||||||||||||||||  ||||| | ||| |                        A CCC   GCC  GGUUGCAGUAAUCGUGGUUCCUGG  AUAAA C AUU A                        A    AGA   GC                        --     - -   - AUAGAGAAAUAAUGUUUAUCUAGA |
Stem-loop sequence | GGGAUGGUACCAAUGUCGUUGGCGCCGAGGACCACUUUGUAAGAAAAAUUAAAAGAAUAUAUUUGUAGCAGAAAAAGAUCUAUUUGUAAUAAAGAGAUAAUUACAAAUAGGUCCUUGGUGCUAAUGACGUUGGCGCCGAGACCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_015761194.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g25630 (LOC4327187), transcript variant X3, mRNA | pentatricopeptide repeat-containing protein At5g25630(LOC4327187) | coding protein | psRNATarget | |||||||||
XM_015761187.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g25630 (LOC4327187), transcript variant X2, mRNA | pentatricopeptide repeat-containing protein At5g25630(LOC4327187) | coding protein | psRNATarget | |||||||||
XM_015761181.1 |
|
2.5 | PREDICTED: Oryza sativa Japonica Group pentatricopeptide repeat-containing protein At5g25630 (LOC4327187), transcript variant X1, mRNA | pentatricopeptide repeat-containing protein At5g25630(LOC4327187) | coding protein | psRNATarget | |||||||||
AK105248.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:001-114-A12, full insert sequence | NA | coding protein | psRNATarget |