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BaseInfo

ncRNA ID osa-miRf10293-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - GGUGUUUGGGAACAGGGACUAAA - NA
Stem-loop(if miRNA)    U            -C          G    AC         AAAACCA
AGG GGUGUUUGGGAA  AGGGACUAAA UUUA  CCCUCUCUC       U
||| ||||||||||||  |||||||||| ||||  |||||||||       A
UCC CCACAAACCUUU  UCCCUGAUUU AAAU  GGGAGAGGG       A
   C            CC          G    CA         AUCUCUG
Stem-loop sequence AGGUGGUGUUUGGGAACAGGGACUAAAGUUUAACCCCUCUCUCAAAACCAUAAGUCUCUAGGGAGAGGGACUAAAGUUUAGUCCCUCCUUUCCAAACACCCCCU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015782073.1
ncRNA:23   AAAUCAGGGA-CAAGGGUUUGUGG   1
  ||||||||||-|||||||||||||
targets:479   UUUAGUCCCUUGUUCCCAAACACC   502

3.0 PREDICTED: Oryza sativa Japonica Group NAD(P)H dehydrogenase (quinone) FQR1 (LOC4339236), mRNA NAD(P)H dehydrogenase (quinone) FQR1(LOC4339236) coding protein psRNATarget
FJ750944.1
ncRNA:23   AAAUCAGGGACAAGGGUUUGUGG   1
  ||||||||=*|||||||||||||
targets:1225   UUUAGUCCUAGUUCCCAAACACC   1247

2.0 Oryza sativa clone KCS020C02 MADS-box transcription factor 21 mRNA, complete cds NA coding protein psRNATarget
XM_015765696.1
ncRNA:23   AAAUCAGGGACAAGGGUUUGUGG   1
  ||||||||=*|||||||||||||
targets:1258   UUUAGUCCUAGUUCCCAAACACC   1280

2.0 PREDICTED: Oryza sativa Japonica Group MADS-box transcription factor 21 (LOC4324888), mRNA MADS-box transcription factor 21(LOC4324888) coding protein psRNATarget
AK070958.1
ncRNA:23   AAAUCAGGGACAAGGGUUUGUGG   1
  ||||||||=*|||||||||||||
targets:1259   UUUAGUCCUAGUUCCCAAACACC   1281

2.0 Oryza sativa Japonica Group cDNA clone:J023065L09, full insert sequence NA coding protein psRNATarget