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BaseInfo

ncRNA ID	osa-miRf10289-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	22
Mature sequence(if miRNA)	NA - GCCCACAUGUCAUCCCCUCUCU - NA
Stem-loop(if miRNA)	A   A          C              ---------------  G    G GACAU UGG GCCCACAUGU AUCCCCUCUCUCUC               CG UUGU A ||||| ||| |||||||||| ||||||||||||||               || |||| U CUGUA ACC CGGGUGUACA UAGGGGAGAGAGGG               GC GACG G      C   -          A              AAGAGAGAAGGGGAA  G    G
Stem-loop sequence	GACAUAUGGAGCCCACAUGUCAUCCCCUCUCUCUCCGGUUGUGAUGGGCAGGCGAAGGGGAAGAGAGAAGGGAGAGAGGGGAUAACAUGUGGGCCCACAUGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK068046.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||=||||||||||||||||||| targets:1028   AGGGAGGGGAUGACAUGUGGGC   1049 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:J013132J07, full insert sequence	NA	coding protein	psRNATarget
XM_015778992.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||=||||||||||||||||||| targets:1021   AGGGAGGGGAUGACAUGUGGGC   1042 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107280564 (LOC107280564), mRNA	uncharacterized LOC107280564(LOC107280564)	coding protein	psRNATarget
XM_015758454.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||||||*||||||||||||||| targets:743   AGAGAGAGGAUGACAUGUGGGC   764 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group probable serine/threonine-protein kinase At1g54610 (LOC107279156), mRNA	probable serine/threonine-protein kinase At1g54610(LOC107279156)	coding protein	psRNATarget
AK242025.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   |||||||*|||||||||||||| targets:663   AGAGAGGAGAUGACAUGUGGGC   684 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J075112L09, full insert sequence	NA	coding protein	psRNATarget
AK289042.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   =|||||*||||||||||||||| targets:1371   GGAGAGAGGAUGACAUGUGGGC   1392 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090092D10, full insert sequence	NA	coding protein	psRNATarget
XM_015767270.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   =|||||*||||||||||||||| targets:1165   GGAGAGAGGAUGACAUGUGGGC   1186 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group S-type anion channel SLAH3-like (LOC107279894), mRNA	S-type anion channel SLAH3-like(LOC107279894)	coding protein	psRNATarget
AK108132.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||||||*|||||=||||||||| targets:719   AGAGAGAGGAUGGCAUGUGGGC   740 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:002-139-D11, full insert sequence	NA	coding protein	psRNATarget
AK288073.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||||||*||||||||||||||* targets:629   AGAGAGAGGAUGACAUGUGGGG   650 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J075161O09, full insert sequence	NA	coding protein	psRNATarget
XM_015773884.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   =|||||*||||||=|||||||| targets:390   GGAGAGAGGAUGAUAUGUGGGC   411 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4333380 (LOC4333380), mRNA	uncharacterized LOC4333380(LOC4333380)	coding protein	psRNATarget
XM_015788638.1	ncRNA:22   UCUCUCCC-CUACUGUACACCCG   1   =*||||||-|||||||||||||| targets:712   GAAGAGGGAGAUGACAUGUGGGC   734 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281451 (LOC107281451), mRNA	uncharacterized LOC107281451(LOC107281451)	coding protein	psRNATarget
AK063127.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||=|||*||||||||||||||* targets:292   AGGGAGAGGAUGACAUGUGGGG   313 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA clone:001-111-F02, full insert sequence	NA	coding protein	psRNATarget
XM_015763946.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||||||*|||||||||||||*| targets:1000   AGAGAGAGGAUGACAUGUGGAC   1021 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group probable serine/threonine-protein kinase At1g54610 (LOC107279713), mRNA	probable serine/threonine-protein kinase At1g54610(LOC107279713)	coding protein	psRNATarget
AK241336.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   =|||||*||||*|||||||||| targets:595   GGAGAGAGGAUAACAUGUGGGC   616 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J065144K02, full insert sequence	NA	coding protein	psRNATarget
AK288031.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   =|||||*|*||||||||||||* targets:999   GGAGAGAGAAUGACAUGUGGGG   1020 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J075138N13, full insert sequence	NA	coding protein	psRNATarget
XM_015766066.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||=|*|*||||||||||||||* targets:865   AGGGUGAGGAUGACAUGUGGGG   886 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group actin-97 (LOC9269066), mRNA	actin-97(LOC9269066)	coding protein	psRNATarget
XM_015774162.1	ncRNA:22   UCUCUCCCCUACUGUACACCCG   1   ||*|||*|*||||||||||||| targets:3887   AGUGAGUGUAUGACAUGUGGGC   3908 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4334163 (LOC4334163), mRNA	uncharacterized LOC4334163(LOC4334163)	coding protein	psRNATarget