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BaseInfo

ncRNA ID osa-miRf10286-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 25
Mature sequence(if miRNA) NA - CGUGUCCAGGUUCAUAGCCAGGAUU - NA
Stem-loop(if miRNA)       GU C      A    C                CCU
AAAAAA  C AAUCCU GCUA GAACCUGGACAUGUAU   G
||||||  | |||||| |||| ||||||||||||||||   G
UUUUUU  G UUAGGA CGAU CUUGGACCUGUGCGUA   A
      UG U      C    A                CAC
Stem-loop sequence AAAAAAGUCCAAUCCUAGCUACGAACCUGGACAUGUAUCCUGGACACAUGCGUGUCCAGGUUCAUAGCCAGGAUUUGGUUUUUUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015759372.1
ncRNA:25   UUAGGACCGAUACUUGGACCUGUGC   1
  ||||||*||||*|||||||||||||
targets:1738   AAUCCUAGCUACGAACCUGGACACG   1762

2.0 PREDICTED: Oryza sativa Japonica Group bifunctional riboflavin kinase/FMN phosphatase (LOC4348834), transcript variant X2, mRNA bifunctional riboflavin kinase/FMN phosphatase(LOC4348834) coding protein psRNATarget
AK105256.1
ncRNA:25   UUAGGACCGAUACUUGGACCUGUGC   1
  |||||||**||||||||||||||||
targets:1541   AAUCCUGAGUAUGAACCUGGACACG   1565

2.0 Oryza sativa Japonica Group cDNA clone:001-114-F05, full insert sequence NA coding protein psRNATarget
AK066663.1
ncRNA:25   UUAGGACCGAUACUUGGACCUGUGC   1
  ||||||*||||*|||||||||||||
targets:1782   AAUCCUAGCUACGAACCUGGACACG   1806

2.0 Oryza sativa Japonica Group cDNA clone:J013071M21, full insert sequence NA coding protein psRNATarget
XM_015759371.1
ncRNA:25   UUAGGACCGAUACUUGGACCUGUGC   1
  ||||||*||||*|||||||||||||
targets:1815   AAUCCUAGCUACGAACCUGGACACG   1839

2.0 PREDICTED: Oryza sativa Japonica Group bifunctional riboflavin kinase/FMN phosphatase (LOC4348834), transcript variant X1, mRNA bifunctional riboflavin kinase/FMN phosphatase(LOC4348834) coding protein psRNATarget
XM_015766483.1
ncRNA:25   UUAGGACCGAUACUUGGACCUGUGC   1
  |||||||**||||||||||||||||
targets:1629   AAUCCUGAGUAUGAACCUGGACACG   1653

2.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4326084 (LOC4326084), transcript variant X1, mRNA uncharacterized LOC4326084(LOC4326084) coding protein psRNATarget