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BaseInfo

ncRNA ID	osa-miRf10285-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CCGGUUGGUAACACUAACCGGGA - NA
Stem-loop(if miRNA)	AG           A          A     A   U GGUCUUU  UCCCGGUUAGU UUACCAACCG GACUA AGA C |||||||  ||||||||||| |||||||||| ||||| ||| CUAGAAA  AGGGCCAAUCA AAUGGUUGGC CUGAU UUU U        AA           C          C     G   A
Stem-loop sequence	GGUCUUUAGUCCCGGUUAGUAUUACCAACCGAGACUAAAGAUCUAUUUGUAGUCCCGGUUGGUAACACUAACCGGGAAAAAAGAUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288424.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   ||||||||||||||||||||||| targets:2390   UCCCGGUUAGUGUUACCAACCGG   2412 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090032J12, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   ||||||||=|||||||||||||| targets:156   UCCCGGUUGGUGUUACCAACCGG   178 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   ||||||||=||*||||||||||| targets:113   UCCCGGUUGGUUUUACCAACCGG   135 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288796.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   ||||||||=|||||||||||||| targets:1839   UCCCGGUUGGUGUUACCAACCGG   1861 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090070F05, full insert sequence	NA	coding protein	psRNATarget
XM_015758314.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   ||||||||*|||||||||||||| targets:915   UCCCGGUUUGUGUUACCAACCGG   937 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278346 (LOC107278346), transcript variant X1, mRNA	uncharacterized LOC107278346(LOC107278346)	coding protein	psRNATarget
XM_015755226.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   ||||||||=*||||||||||||| targets:79   UCCCGGUUGAUGUUACCAACCGG   101 Target Full Sequence	2.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107278786 (LOC107278786), mRNA	uncharacterized LOC107278786(LOC107278786)	coding protein	psRNATarget
AK288405.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   ||||*|||=|||||||||||||| targets:2397   UCCCCGUUGGUGUUACCAACCGG   2419 Target Full Sequence	2.0	Oryza sativa Japonica Group cDNA, clone: J090030E11, full insert sequence	NA	coding protein	psRNATarget
LQ236648.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   *|||||||=|||*|||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGG   74 Target Full Sequence	2.5	Sequence 2643 from Patent EP2985353	NA	coding protein	psRNATarget
HI404518.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   *|||||||=|||*|||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGG   74 Target Full Sequence	2.5	Sequence 2643 from Patent EP2074227	NA	coding protein	psRNATarget
JB164979.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   *|||||||=|||*|||||||||| targets:52   CCCCGGUUGGUGCUACCAACCGG   74 Target Full Sequence	2.5	Sequence 2643 from Patent EP2559767	NA	coding protein	psRNATarget
AK288624.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGG-CC   1   |*|||||||||||||||||||-|| targets:4962   UACCGGUUAGUGUUACCAACCAGG   4985 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA, clone: J090054H14, full insert sequence	NA	coding protein	psRNATarget
AK065811.1	ncRNA:23   AGGGCCAAUCACAAUGGUUGGCC   1   **||||||*||||||=||||||| targets:1174   CACCGGUUUGUGUUAUCAACCGG   1196 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013039F07, full insert sequence	NA	coding protein	psRNATarget