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BaseInfo

ncRNA ID	ath-miRf10076-npr
Species	Arabidopsis thaliana
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUACUCGACCAAGGGGUCGAGUG - NA
Stem-loop(if miRNA)	-GA         AGG         -    --- G     G G  U     GGUGG         A    UACUCGACC   UGGUCGAGU GAAG   U AUCGA U AC CUCAU     UACUCGGCC G    |||||||||   ||||||||| ||||   | ||||| | || |||||     |||||||||    GUGAGCUGG   ACCAGCUCA CUUC   A UAGUU A UG GAGUG     GUGAGCUGG G CUG         GGA         U    UGA G     A G  -     -----         A
Stem-loop sequence	GAUACUCGACCAGGUGGUCGAGUGAAGUGAUCGAGUGACUCUCAUGGUGGUACUCGGCCAGGAGGUCGAGUGGUGAGGUGAAUUGAUGAAGUCUUCUACUCGACCAAGGGGUCGAGUGGUC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
DQ069808.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||| targets:91   CACUCGACCCCCUGGUCGAGUAG   113 Target Full Sequence	1.5	Arabidopsis thaliana At2g10880 mRNA, partial sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||| targets:490   CACUCGACCCCGUGGUCGAGUAG   512 Target Full Sequence	1.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||| targets:125   CACUCGACCCCCUGGUCGAGUAG   147 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||| targets:500   CACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||| targets:500   CACUCGACCCCCUGGUCGAGUAG   522 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183042.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||| targets:1572   CACUCGACCCCCUGGUCGAGUAG   1594 Target Full Sequence	1.5	Arabidopsis thaliana clone asmbl_11759 unknown mRNA sequence	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||* targets:536   CACUCGACCCCAUGGUCGAGUAC   558 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
AY231407.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   =||*|||||||*||||||||||* targets:584   UACYCGACCCCCUGGUCGAGUAU   606 Target Full Sequence	2.5	Arabidopsis thaliana hypothetical protein (At2g11090/F15K19.16) mRNA, complete cds	NA	coding protein	psRNATarget
EF183192.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   ||*||*|||||*||||||||||| targets:170   CAGUCAACCCCGUGGUCGAGUAG   192 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2299 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183193.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   ||*||*|||||*||||||||||| targets:545   CAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2300 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183191.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   ||*||*|||||*||||||||||| targets:545   CAGUCAACCCCGUGGUCGAGUAG   567 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_2298 unknown mRNA sequence	NA	coding protein	psRNATarget
EF183005.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   =||||||||=|||||||||||=| targets:2015   UACUCGACCUCUUGGUCGAGUGG   2037 Target Full Sequence	2.5	Arabidopsis thaliana clone asmbl_10069 unknown mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||* targets:231   CACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT015478.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   =||||||||||*||||||||||* targets:182   UACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   |||||||||||*||||||||||* targets:231   CACUCGACCCCCUGGUCGAGUAU   253 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT014714.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   =||||||||||*||||||||||* targets:182   UACUCGACCCCCUGGUCGAGUAU   204 Target Full Sequence	2.5	Arabidopsis thaliana At4g05636.1 mRNA sequence	NA	coding protein	psRNATarget
BT025674.1	ncRNA:23   GUGAGCUGGGGAACCAGCUCAUC   1   =||||||||||*||||||||||* targets:309   UACUCGACCCCCUGGUCGAGUAU   331 Target Full Sequence	2.5	Arabidopsis thaliana	NA	coding protein	psRNATarget