ncRNA ID | osa-miRf10278-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - AGGUAUCAUCCCGUCUGAACG - NA |
Stem-loop(if miRNA) |
     CCG   A    UA                C   GC   A      AUAGAUG    CU -A        UCGAACGGGAUGGUACCUCUG GGUAU   GUU AGAC  GAUGAUACCUCAGAGG AUC  CUA UACCUG       UCAG  G  UACCCCGU                     A |||||   ||| ||||  |||||||||||||||| |||  ||| ||||||       ||||  |  |||||||| CCAUA   CAA UCUG  CUACUAUGGAGUCUCC UAG  GAU AUGGAC       CCAU  A  AGGCUAUG                     G      AUG   G    CC                A   AA   -      -------    -- GU        GAUAAUCCAUGGUCUGUUAUG |
Stem-loop sequence | GGUAUCCGGUUAAGACUAGAUGAUACCUCAGAGGCAUCGCCUAAUACCUGAUAGAUGUCAGCUGAUACCCCGUUCGAACGGGAUGGUACCUCUGAGGUAUUGUCUGGUACCUAAUAGGUAUCGGAUGAUACCCAGGUAUAGAAGAUACCUCUGAGGUAUCAUCCCGUCUGAACGUAAUACC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
HI403673.1 |
|
2.5 | Sequence 1798 from Patent EP2074227 | NA | coding protein | psRNATarget | |||||||||
JB164134.1 |
|
2.5 | Sequence 1798 from Patent EP2559767 | NA | coding protein | psRNATarget | |||||||||
LQ235803.1 |
|
2.5 | Sequence 1798 from Patent EP2985353 | NA | coding protein | psRNATarget | |||||||||
AK072384.1 |
|
2.5 | Oryza sativa Japonica Group cDNA clone:J023078E13, full insert sequence | NA | coding protein | psRNATarget |