ncRNA ID | osa-miRf10274-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UUAUGGCCCGUCACAGAUGAG - NA |
Stem-loop(if miRNA) |
    G          CAAU      UA    -AUA   C UCAC      CCA      CAAU     AUUA GGAU AUACUCAUCU    CGGGCC  AACU    GCC G    AGAUGA   UCAUCU    CGGGC    A |||| ||||||||||    ||||||  ||||    ||| |    ||||||   ||||||    ||||| CCUA UAUGAGUAGA    GCCCGG  UUGA    CGG C    UCUAUU   AGUAGA    GCCCG    C     A          CACU      UA    AUCA   A UAAC      CCC      CACU     AUAU |
Stem-loop sequence | GGAUGAUACUCAUCUCAAUCGGGCCUAAACUAUAGCCCGUCACAGAUGACCAUCAUCUCAAUCGGGCAUUAACUAUAGCCCGUCACAGAUGACCCUUAUCUCAAUCAGGCACUAAGUUAUGGCCCGUCACAGAUGAGUAUAAUCC |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK288547.1 |
|
2.5 | Oryza sativa Japonica Group cDNA, clone: J090046I18, full insert sequence | NA | coding protein | psRNATarget | |||||||||
AK107543.1 |
|
1.5 | Oryza sativa Japonica Group cDNA clone:002-129-H11, full insert sequence | NA | coding protein | psRNATarget |