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BaseInfo

ncRNA ID osa-miRf10271-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - UGACCUCAAAACCGGCACCU - NA
Stem-loop(if miRNA)                                  -ACCUAA  G   C     CUA
GUGCCGGUUUUGACCUCAAAACCGGCACCUAUU       UA GUG CAGUU   A
|||||||||||||||||||||||||||||||||       || ||| |||||
CACGGCCAAAACUGGAGUUUUGGUCGUGGAUAA       GU CAC GUUAA   G
                                 ACUGUCA  G   C     ACC
Stem-loop sequence GUGCCGGUUUUGACCUCAAAACCGGCACCUAUUACCUAAUAGGUGCCAGUUCUAAGCCAAAUUGCCACGUGACUGUCAAAUAGGUGCUGGUUUUGAGGUCAAAACCGGCAC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015787894.1
ncRNA:20   UCCACGGCCAAAACUCCAGU   1
  =**||*||||||||||||||
targets:1197   GUAUGACGGUUUUGAGGUCA   1216

3.0 PREDICTED: Oryza sativa Japonica Group probable sucrose-phosphate synthase 3 (LOC4341642), transcript variant X5, mRNA probable sucrose-phosphate synthase 3(LOC4341642) coding protein psRNATarget
XM_015787895.1
ncRNA:20   UCCACGGCCAAAACUCCAGU   1
  =**||*||||||||||||||
targets:878   GUAUGACGGUUUUGAGGUCA   897

3.0 PREDICTED: Oryza sativa Japonica Group probable sucrose-phosphate synthase 3 (LOC4341642), transcript variant X6, mRNA probable sucrose-phosphate synthase 3(LOC4341642) coding protein psRNATarget
XM_015787893.1
ncRNA:20   UCCACGGCCAAAACUCCAGU   1
  =**||*||||||||||||||
targets:1317   GUAUGACGGUUUUGAGGUCA   1336

3.0 PREDICTED: Oryza sativa Japonica Group probable sucrose-phosphate synthase 3 (LOC4341642), transcript variant X4, mRNA probable sucrose-phosphate synthase 3(LOC4341642) coding protein psRNATarget
XM_015787892.1
ncRNA:20   UCCACGGCCAAAACUCCAGU   1
  =**||*||||||||||||||
targets:1324   GUAUGACGGUUUUGAGGUCA   1343

3.0 PREDICTED: Oryza sativa Japonica Group probable sucrose-phosphate synthase 3 (LOC4341642), transcript variant X3, mRNA probable sucrose-phosphate synthase 3(LOC4341642) coding protein psRNATarget
XM_015787891.1
ncRNA:20   UCCACGGCCAAAACUCCAGU   1
  =**||*||||||||||||||
targets:1457   GUAUGACGGUUUUGAGGUCA   1476

3.0 PREDICTED: Oryza sativa Japonica Group probable sucrose-phosphate synthase 3 (LOC4341642), transcript variant X2, mRNA probable sucrose-phosphate synthase 3(LOC4341642) coding protein psRNATarget
XM_015787890.1
ncRNA:20   UCCACGGCCAAAACUCCAGU   1
  =**||*||||||||||||||
targets:1460   GUAUGACGGUUUUGAGGUCA   1479

3.0 PREDICTED: Oryza sativa Japonica Group probable sucrose-phosphate synthase 3 (LOC4341642), transcript variant X1, mRNA probable sucrose-phosphate synthase 3(LOC4341642) coding protein psRNATarget