ncRNA ID | osa-miRf10268-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - CUUGCAUGGAGUGCCAAACA - NA |
Stem-loop(if miRNA) |
U                                      CAUUU    -  A       GCCAAACACCA  GUUCGCUUGCAUGGAGUGCCAAACACCAUAGUUUCUGA     UUGG AA CUAUAGU           U  ||||||||||||||||||||||||||||||||||||||     |||| || |||||||           G  CAAGUGAACGUACCUCACGGUUUGUGGUAUCAAAGACU     AGCC UU GAUAUCA           C A                                      -----    A  G       AAGAUUAAAAA |
Stem-loop sequence | UGUUCGCUUGCAUGGAGUGCCAAACACCAUAGUUUCUGACAUUUUUGGAAACUAUAGUGCCAAACACCAUGCAAAAAUUAGAAACUAUAGGUUACCGAUCAGAAACUAUGGUGUUUGGCACUCCAUGCAAGUGAACA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
CT835473.1 |
|
1.5 | Oryza sativa (indica cultivar-group) cDNA clone:OSIGCSN033A11, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015767897.1 |
|
1.5 | PREDICTED: Oryza sativa Japonica Group prefoldin subunit 6 (LOC4328867), mRNA | prefoldin subunit 6(LOC4328867) | coding protein | psRNATarget | |||||||||
AK241832.1 |
|
1.5 | Oryza sativa Japonica Group cDNA, clone: J065213C07, full insert sequence | NA | coding protein | psRNATarget |