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BaseInfo

ncRNA ID osa-miRf10265-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 23
Mature sequence(if miRNA) NA - CCGGUUAGUGUUACCAACCGGGA - NA
Stem-loop(if miRNA)                 A   U   C                A
AUCUUUAGUCCCGGUU GUG UAC AACCGGGACUAAAGAU A
|||||||||||||||| ||| ||| |||||||||||||||| U
UAGAAAUCAGGGCCAA CAU GUG UUGGCCCUGAUUUCUA A
                C   U   A                G
Stem-loop sequence AUCUUUAGUCCCGGUUAGUGUUACCAACCGGGACUAAAGAUAAUAGAUCUUUAGUCCCGGUUAGUGUUACCAACCGGGACUAAAGAU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK242216.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  ||||||||||||||||*||||||
targets:667   UCCCGGUUGGUAACACCAACCGG   689

1.5 Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence NA coding protein psRNATarget
AK289098.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  ||||||||||||||||*||||||
targets:247   UCCCGGUUGGUAACACCAACCGG   269

1.5 Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence NA coding protein psRNATarget
AK288224.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  ||||||||||||||||*||||||
targets:1852   UCCCGGUUGGUAACACCAACCGG   1874

1.5 Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence NA coding protein psRNATarget
AK288224.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  |||||||||*||||||*||||||
targets:1269   UCCCGGUUGAUAACACAAACCGG   1291

2.5 Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence NA coding protein psRNATarget
AK288734.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  ||||||||||||||||*||||||
targets:56   UCCCGGUUGGUAACACCAACCGG   78

1.5 Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence NA coding protein psRNATarget
AK119354.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  |||=||||||||||||*||||||
targets:74   UCCUGGUUGGUAACACCAACCGG   96

1.5 Oryza sativa Japonica Group cDNA clone:001-131-F10, full insert sequence NA coding protein psRNATarget
XM_015792800.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  |||=||||||||||||*||||||
targets:683   UCCUGGUUGGUAACACCAACCGG   705

1.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346359 (LOC4346359), transcript variant X3, mRNA uncharacterized LOC4346359(LOC4346359) coding protein psRNATarget
AK121472.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  |=||||||||||||||*||||||
targets:2069   UUCCGGUUGGUAACACCAACCGG   2091

1.5 Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence NA coding protein psRNATarget
AK288438.1
ncRNA:23   AGGGCCAACCAUUGUGAUUGGCC   1
  *|||||||||||||||*||||||
targets:1320   CCCCGGUUGGUAACACCAACCGG   1342

1.5 Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence NA coding protein psRNATarget
XM_015758676.1
ncRNA:23   AGG-GCCAACCAUUGUGAUUGGCC   1
  |||-|||||*|||||||*||||||
targets:1986   UCCUCGGUUAGUAACACCAACCGG   2009

2.5 PREDICTED: Oryza sativa Japonica Group polyubiquitin-like (LOC107279205), mRNA polyubiquitin-like(LOC107279205) coding protein psRNATarget