ncRNA ID | osa-miRf10264-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 20 |
Mature sequence(if miRNA) | NA - CCUCACCUUUGACGGGUUCC - NA |
Stem-loop(if miRNA) |
       -     A                       AUAUUUG     A UUUACC CAAAAAU GGAAC UGUCAAAGGUGAGGUAAAGUCAA       GCCUG C      U ||||||| ||||| |||||||||||||||||||||||       ||||| | GUUUUUA CCUUG GCAGUUUCCACUCCAUUUCAGUU       UGGGC G      C        A     G                       -------     A UUUCCA |
Stem-loop sequence | CAAAAAUGGAACAUGUCAAAGGUGAGGUAAAGUCAAAUAUUUGGCCUGACUUUACCUCACCUUUGACGGGUUUGACUUUACCUCACCUUUGACGGGUUCCAAUUUUUG |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK109815.1 |
|
1.0 | Oryza sativa Japonica Group cDNA clone:002-147-H07, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015761270.1 |
|
1.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9270068 (LOC9270068), mRNA | uncharacterized LOC9270068(LOC9270068) | coding protein | psRNATarget | |||||||||
XM_015779949.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group probable alpha-amylase 2 (LOC4335737), mRNA | probable alpha-amylase 2(LOC4335737) | coding protein | psRNATarget |