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BaseInfo

ncRNA ID	osa-miRf10260-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CUUGAGGAGGUAACAUGAGGUAC - NA
Stem-loop(if miRNA)	G   C           A         C  -AAAA    G      A           A        CAUA UAC GUU UUGAGGAGGUA CAUGAGGUA CA     UUUA UGUAAA UUUGGUACCUC UGGUACCU    G ||| ||| ||||||||||| ||||||||| ||     |||| |||||| ||||||||||| |||||||| AUG CAA AACUCCUCCAU GUACUCCAU GU     AGAU ACAUUU AAACCAUGGAG ACCAUGGA    U    A   A           G         A  GAAAA    A      -           A        UCCA
Stem-loop sequence	UACGGUUCUUGAGGAGGUAACAUGAGGUACCAAAAAUUUAGUGUAAAAUUUGGUACCUCAUGGUACCUCAUAGUACCUAGGUACCAAGAGGUACCAAAUUUACAAUAGAAAAAGUGAUACCUCAUGGUACCUCCUCAAAAACAGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK065584.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   ||||||||||*|||||||||||| targets:1457   GUACCUCAUGGUACCUCCUCAAG   1479 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013033A03, full insert sequence	NA	coding protein	psRNATarget
AK242475.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   ||||||||||*|||||||||||| targets:1303   GUACCUCAUGGUACCUCCUCAAG   1325 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J080303E02, full insert sequence	NA	coding protein	psRNATarget
AK119399.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   ||||||||||*|||||||||||| targets:643   GUACCUCAUGGUACCUCCUCAAG   665 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-132-D12, full insert sequence	NA	coding protein	psRNATarget
XM_015777564.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   ||||||||||*|||||||||||| targets:653   GUACCUCAUGGUACCUCCUCAAG   675 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group B3 domain-containing protein Os03g0619600 (LOC4333464), transcript variant X2, mRNA	B3 domain-containing protein Os03g0619600(LOC4333464)	coding protein	psRNATarget
XM_015777563.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   ||||||||||*|||||||||||| targets:653   GUACCUCAUGGUACCUCCUCAAG   675 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group B3 domain-containing protein Os03g0619600 (LOC4333464), transcript variant X1, mRNA	B3 domain-containing protein Os03g0619600(LOC4333464)	coding protein	psRNATarget
AK120403.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   ||||||||||*|||||||||||| targets:1553   GUACCUCAUGGUACCUCCUCAAG   1575 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013088K21, full insert sequence	NA	coding protein	psRNATarget
XM_015782130.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   ||||||||||*|||||||||||| targets:1917   GUACCUCAUGGUACCUCCUCAAG   1939 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group leucine--tRNA ligase, cytoplasmic (LOC9272228), mRNA	leucine--tRNA ligase, cytoplasmic(LOC9272228)	coding protein	psRNATarget
AK288954.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   *|||||||||||||||||||||* targets:3640   AUACCUCAUGUUACCUCCUCAAA   3662 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090083O05, full insert sequence	NA	coding protein	psRNATarget
AK105471.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   |||=||||||*|||||||||||| targets:1350   GUAUCUCAUGGUACCUCCUCAAG   1372 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-127-A01, full insert sequence	NA	coding protein	psRNATarget
XM_015765620.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   |||=||||||*|||||||||||| targets:1358   GUAUCUCAUGGUACCUCCUCAAG   1380 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324919), transcript variant X1, mRNA	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324919)	coding protein	psRNATarget
XM_015765621.1	ncRNA:23   CAUGGAGUACAAUGGAGGAGUUC   1   |||=||||||*|||||||||||| targets:1376   GUAUCUCAUGGUACCUCCUCAAG   1398 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 (LOC4324919), transcript variant X3, mRNA	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380(LOC4324919)	coding protein	psRNATarget