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BaseInfo

ncRNA ID	osa-miRf10254-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - CUCGUUAUCCUAACGAGCUU - NA
Stem-loop(if miRNA)	UUUU                  ----  -   UC U GGU    AGCUCGUUAGGAUAACGA    GC CGG  C A |||    ||||||||||||||||||    || |||  | CCA    UCGAGCAAUCCUAUUGCU    CG GCC  G A    --UU                  CAAC  A   GA C
Stem-loop sequence	GGUUUUUAGCUCGUUAGGAUAACGAGCCGGUCCUAACGAGCCGAGCCAACUCGUUAUCCUAACGAGCUUUACC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015779748.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   |||||||||||||||||||| targets:243   AAGCUCGUUAGGAUAACGAG   262 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group cyclic dof factor 2 (LOC4324267), mRNA	cyclic dof factor 2(LOC4324267)	coding protein	psRNATarget
AK109175.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||||||||||||| targets:559   UAGCUCGUUAGGAUAACGAG   578 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA clone:002-155-H10, full insert sequence	NA	coding protein	psRNATarget
XM_015793085.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||||||||||||| targets:557   UAGCUCGUUAGGAUAACGAG   576 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X1, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
XM_015793088.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||||||||||||| targets:569   UAGCUCGUUAGGAUAACGAG   588 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC107281835 (LOC107281835), transcript variant X3, mRNA	uncharacterized LOC107281835(LOC107281835)	coding protein	psRNATarget
XM_015757797.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||||||||||||| targets:538   UAGCUCGUUAGGAUAACGAG   557 Target Full Sequence	0.0	PREDICTED: Oryza sativa Japonica Group wall-associated receptor kinase 1 (LOC4347988), transcript variant X1, mRNA	wall-associated receptor kinase 1(LOC4347988)	coding protein	psRNATarget
AF216531.1	ncRNA:20   UUCGAGCAAUC-CUAUUGCUC   1   *||||||||||-||||||||| targets:219   UAGCUCGUUAGAGAUAACGAG   239 Target Full Sequence	3.0	Oryza sativa extensin-like proline-rich protein RiP-5 mRNA, partial cds	NA	coding protein	psRNATarget
AK069819.1	ncRNA:20   UUCGAGCAAUC-CUAUUGCUC   1   *||||||||||-||||||||| targets:1423   UAGCUCGUUAGAGAUAACGAG   1443 Target Full Sequence	3.0	Oryza sativa Japonica Group cDNA clone:J023026N18, full insert sequence	NA	coding protein	psRNATarget
XM_015771083.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||||*|||||||| targets:186   UAGCUCGUUAGAAUAACGAG   205 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group probable purine permease 11 (LOC4330368), transcript variant X1, mRNA	probable purine permease 11(LOC4330368)	coding protein	psRNATarget
AK107074.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||*|||||||||| targets:602   UAGCUCGUUUGGAUAACGAG   621 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:002-121-F02, full insert sequence	NA	coding protein	psRNATarget
AK065336.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||||*|||||||| targets:558   UAGCUCGUUAGAAUAACGAG   577 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J013000O22, full insert sequence	NA	coding protein	psRNATarget
XM_015784040.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *||||||||*|||||||||| targets:299   UAGCUCGUUUGGAUAACGAG   318 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group hypersensitive-induced response protein 1 (LOC4339791), transcript variant X2, mRNA	hypersensitive-induced response protein 1(LOC4339791)	coding protein	psRNATarget
AK288737.1	ncRNA:20   UUCGAGCAAUCCUAUUGCUC   1   *|||||*||||||||||||| targets:1918   UAGCUCAUUAGGAUAACGAG   1937 Target Full Sequence	1.0	Oryza sativa Japonica Group cDNA, clone: J090063M20, full insert sequence	NA	coding protein	psRNATarget