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BaseInfo

ncRNA ID	osa-miRf10251-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	20
Mature sequence(if miRNA)	NA - GGAUUUUGGAGGGAUGUGAC - NA
Stem-loop(if miRNA)	-      A         C C      ---  A   CG UAAGGA UUUUGG GGGAUGUGA A AUCCUA   GU CUA  A |||||| |||||| ||||||||| | ||||||   || ||| AUUCCU AAAACC CCCUACACU U UAGGAU   CA GGU  A       U      A         A A      GGA  -   CU
Stem-loop sequence	UAAGGAUUUUGGAGGGAUGUGACACAUCCUAGUACUACGAAUCUGGACAGGUAGGAUAUAUCACAUCCCACCAAAAUUCCUUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_015792363.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||||||||||=||||||| targets:2088   GUCACAUCCCUCUAAAAUCC   2107 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein RFT1 homolog (LOC4343254), transcript variant X2, mRNA	protein RFT1 homolog(LOC4343254)	coding protein	psRNATarget
XM_015792362.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||||||||||=||||||| targets:2205   GUCACAUCCCUCUAAAAUCC   2224 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group protein RFT1 homolog (LOC4343254), transcript variant X1, mRNA	protein RFT1 homolog(LOC4343254)	coding protein	psRNATarget
AK288180.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||||||||||=||||||| targets:1339   GUCACAUCCCUCUAAAAUCC   1358 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090005C24, full insert sequence	NA	coding protein	psRNATarget
JB164307.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||=|||||||=||||||| targets:79   GUCAUAUCCCUCUAAAAUCC   98 Target Full Sequence	2.5	Sequence 1971 from Patent EP2559767	NA	coding protein	psRNATarget
HI403846.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||=|||||||=||||||| targets:79   GUCAUAUCCCUCUAAAAUCC   98 Target Full Sequence	2.5	Sequence 1971 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235976.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||=|||||||=||||||| targets:79   GUCAUAUCCCUCUAAAAUCC   98 Target Full Sequence	2.5	Sequence 1971 from Patent EP2985353	NA	coding protein	psRNATarget
XM_015778756.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||=||||=|||||||||| targets:1392   GUCAUAUCCUUCCAAAAUCC   1411 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group RING-H2 finger protein ATL72 (LOC4335822), transcript variant X1, mRNA	RING-H2 finger protein ATL72(LOC4335822)	coding protein	psRNATarget
XM_015770193.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   *|||=||||||||||||||| targets:1136   AUCAUAUCCCUCCAAAAUCC   1155 Target Full Sequence	1.0	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4329136 (LOC4329136), transcript variant X1, mRNA	uncharacterized LOC4329136(LOC4329136)	coding protein	psRNATarget
XM_015787746.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   ||||||||||*||||||||= targets:2307   GUCACAUCCCACCAAAAUCU   2326 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group protein ROOT PRIMORDIUM DEFECTIVE 1 (LOC4340709), mRNA	protein ROOT PRIMORDIUM DEFECTIVE 1(LOC4340709)	coding protein	psRNATarget
JB164206.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   *||*|||||||||||||||| targets:74   AUCUCAUCCCUCCAAAAUCC   93 Target Full Sequence	1.0	Sequence 1870 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235875.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   *||*|||||||||||||||| targets:74   AUCUCAUCCCUCCAAAAUCC   93 Target Full Sequence	1.0	Sequence 1870 from Patent EP2985353	NA	coding protein	psRNATarget
HI403745.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   *||*|||||||||||||||| targets:74   AUCUCAUCCCUCCAAAAUCC   93 Target Full Sequence	1.0	Sequence 1870 from Patent EP2074227	NA	coding protein	psRNATarget
XM_015786789.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   *|||==|||||||||||||= targets:2611   CUCAUGUCCCUCCAAAAUCU   2630 Target Full Sequence	3.0	PREDICTED: Oryza sativa Japonica Group disease resistance protein RGA2 (LOC4340758), mRNA	disease resistance protein RGA2(LOC4340758)	coding protein	psRNATarget
AK067739.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   *|||*||||||||*|||||| targets:95   CUCAAAUCCCUCCCAAAUCC   114 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA clone:J013120L17, full insert sequence	NA	coding protein	psRNATarget
XM_015785166.1	ncRNA:20   CAGUGUAGGGAGGUUUUAGG   1   *|||*||||||||*|||||| targets:145   CUCAAAUCCCUCCCAAAUCC   164 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group pumilio homolog 1 (LOC4326392), mRNA	pumilio homolog 1(LOC4326392)	coding protein	psRNATarget