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BaseInfo

ncRNA ID osa-miRf10249-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 20
Mature sequence(if miRNA) NA - CUUGCAUGCAUGCAGGCUAU - NA
Stem-loop(if miRNA) GACCU   U    G  C               A  CG
     AUG AUAG CU GCAUGCAUGCAAGGU GA  A
     ||| |||| || ||||||||||||||| ||
     UAC UAUC GA CGUACGUACGUUCCA CU  C
-CUCU   -    G  -               C  AC
Stem-loop sequence GACCUAUGUAUAGGCUCGCAUGCAUGCAAGGUAGACGACCAUCCACCUUGCAUGCAUGCAGGCUAUCAUUCUC

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_015771425.1
ncRNA:20   UAUCGGACGUACGUACGUUC   1
  |||||*||||||||||||||
targets:1656   AUAGCAUGCAUGCAUGCAAG   1675

1.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4327325 (LOC4327325), mRNA uncharacterized LOC4327325(LOC4327325) coding protein psRNATarget
AK102964.1
ncRNA:20   UAUCGGACGUACGUACGUUC   1
  |||||*||||||||||||||
targets:1657   AUAGCAUGCAUGCAUGCAAG   1676

1.0 Oryza sativa Japonica Group cDNA clone:J033115I17, full insert sequence NA coding protein psRNATarget
XM_015779052.1
ncRNA:20   UAUCGGACGUACGUACGUUC   1
  |||||=||||||||||||*|
targets:1555   AUAGCUUGCAUGCAUGCAUG   1574

2.5 PREDICTED: Oryza sativa Japonica Group homeobox-leucine zipper protein HOX17 (LOC4336580), mRNA homeobox-leucine zipper protein HOX17(LOC4336580) coding protein psRNATarget
XM_015786653.1
ncRNA:20   UAUCGGACGUACGUACGUUC   1
  =||||*||||||||||||*|
targets:551   GUAGCAUGCAUGCAUGCAUG   570

2.5 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC9267858 (LOC9267858), mRNA uncharacterized LOC9267858(LOC9267858) coding protein psRNATarget
AK069645.1
ncRNA:20   UAUCGGACGUACGUACGUUC   1
  =|||||*|||||||||||*|
targets:2287   GUAGCCCGCAUGCAUGCAUG   2306

2.5 Oryza sativa Japonica Group cDNA clone:J023027O16, full insert sequence NA coding protein psRNATarget
XM_015779616.1
ncRNA:20   UAUCGGACGUACGUACGUUC   1
  =|||||*|||||||||||*|
targets:2283   GUAGCCCGCAUGCAUGCAUG   2302

2.5 PREDICTED: Oryza sativa Japonica Group probable metal-nicotianamine transporter YSL10 (LOC4337382), mRNA probable metal-nicotianamine transporter YSL10(LOC4337382) coding protein psRNATarget