Search result

BaseInfo

ncRNA ID	novel_zma_miR6503
Species	Zea mays
Class	miRNA
Genome position	Chr9:26632140-26632189 [+]
Reference genome	RefGen_v4
Source	SRR1618883
Length	24
Mature sequence(if miRNA)	1 - AGAGGAUUAUAUAAUCUGGAUUAU - 24
Stem-loop(if miRNA)	--AGA             UG    A      GGAUUAUAUAAUC  GAUU U      |||||||||||||  ||||      UCUAAUAUAUUAG  UUAA A AUGAG             GU    U
Stem-loop sequence	AGAGGAUUAUAUAAUCUGGAUUAUAUAAUUUGGAUUAUAUAAUCUGAGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EZ055108.1	ncRNA:24   UAUUAGGUCUAAUAUAUUAGGAGA   1   |||||||||||||||||||||||* targets:2   AUAAUCCAGAUUAUAUAAUCCUCC   25 Target Full Sequence	1.0	TSA: Zea mays contig56230, mRNA sequence	NA	coding protein	psRNATarget
XM_008646613.2	ncRNA:24   UAUUAGGUCUAAUAUAUUAGGAGA   1   |||||=|||||||||||||||||* targets:939   AUAAUUCAGAUUAUAUAAUCCUCC   962 Target Full Sequence	2.0	PREDICTED: Zea mays uncharacterized LOC103626209 (LOC103626209), transcript variant X3, mRNA	NA	coding protein	psRNATarget
BT085555.1	ncRNA:24   UAUUAGGUCUAAUAUAUUAGGAGA   1   ||||||||||||||||||||*||* targets:2004   AUAAUCCAGAUUAUAUAAUCAUCC   2027 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFc0032K01 mRNA, complete cds	NA	coding protein	psRNATarget