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BaseInfo

ncRNA ID	novel_zma_miR6497
Species	Zea mays
Class	miRNA
Genome position	Chr5:204626612-204626667 [-]
Reference genome	RefGen_v4
Source	SRR2647386
Length	24
Mature sequence(if miRNA)	33 - ACACUCGGCAAAGAACUUAUACCG - 56
Stem-loop(if miRNA)	--A                UAU   GGU    CACUCGGCAAAGAACU   ACC   G    ||||||||||||||||   |||    GUGAGUUGUUUCUUGG   UGG   C AUC                UUC   AUC
Stem-loop sequence	ACACUCGGCAAAGAACUUAUACCGGUGCCUAGGUCUUGGUUCUUUGUUGAGUGCUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
LQ238815.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   |||||||=|||||||||||||||| targets:37   CGGUAUAGGUUCUUUGCCGAGUGU   60 Target Full Sequence	1.0	Sequence 4810 from Patent EP2985353	NA	coding protein	psRNATarget
JB167146.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   |||||||=|||||||||||||||| targets:37   CGGUAUAGGUUCUUUGCCGAGUGU   60 Target Full Sequence	1.0	Sequence 4810 from Patent EP2559767	NA	coding protein	psRNATarget
HI406685.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   |||||||=|||||||||||||||| targets:37   CGGUAUAGGUUCUUUGCCGAGUGU   60 Target Full Sequence	1.0	Sequence 4810 from Patent EP2074227	NA	coding protein	psRNATarget
LQ239092.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   |||||||=|||||||||||||||| targets:174   CGGUAUAGGUUCUUUGCCGAGUGU   197 Target Full Sequence	1.0	Sequence 5087 from Patent EP2985353	NA	coding protein	psRNATarget
JB167423.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   |||||||=|||||||||||||||| targets:174   CGGUAUAGGUUCUUUGCCGAGUGU   197 Target Full Sequence	1.0	Sequence 5087 from Patent EP2559767	NA	coding protein	psRNATarget
HI406962.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   |||||||=|||||||||||||||| targets:174   CGGUAUAGGUUCUUUGCCGAGUGU   197 Target Full Sequence	1.0	Sequence 5087 from Patent EP2074227	NA	coding protein	psRNATarget
JB169026.1	ncRNA:21   AUAUUCAAGAAACGGCUCACA   1   **||=|||||||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGU   21 Target Full Sequence	1.0	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
HI408565.1	ncRNA:21   AUAUUCAAGAAACGGCUCACA   1   **||=|||||||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGU   21 Target Full Sequence	1.0	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:21   AUAUUCAAGAAACGGCUCACA   1   **||=|||||||||||||||| targets:1   CUUAGGUUCUUUGCCGAGUGU   21 Target Full Sequence	1.0	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
LQ239157.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   *|||*|*=|||||||||||||||* targets:46   AGGUCUUGGUUCUUUGCCGAGUGC   69 Target Full Sequence	3.0	Sequence 5152 from Patent EP2985353	NA	coding protein	psRNATarget
HI407027.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   *|||*|*=|||||||||||||||* targets:46   AGGUCUUGGUUCUUUGCCGAGUGC   69 Target Full Sequence	3.0	Sequence 5152 from Patent EP2074227	NA	coding protein	psRNATarget
JB167488.1	ncRNA:24   GCCAUAUUCAAGAAACGGCUCACA   1   *|||*|*=|||||||||||||||* targets:46   AGGUCUUGGUUCUUUGCCGAGUGC   69 Target Full Sequence	3.0	Sequence 5152 from Patent EP2559767	NA	coding protein	psRNATarget