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BaseInfo

ncRNA ID	novel_zma_miR6487
Species	Zea mays
Class	miRNA
Genome position	Chr5:184030162-184030251 [+]
Reference genome	RefGen_v4
Source	SRR2647386
Length	23
Mature sequence(if miRNA)	1 - GGACUUUAGAUUAUAUAAUCUGA - 23
Stem-loop(if miRNA)	--GGA                   -AA UC        GUU UUU      CUUUAGAUUAUAUAAUCUG   C  AUAAUCUA   G   G      |||||||||||||||||||   |  ||||||||   |   U      GAGGUCUAAUAUAUUAGAC   G  UAUUAGGU   C   U UUAGA                   CGC UU        AAU UAU
Stem-loop sequence	GGACUUUAGAUUAUAUAAUCUGAACUCAUAAUCUAGUUGUUUGUUUAUCUAAUGGAUUAUUUGCGCCAGAUUAUAUAAUCUGGAGAGAUU

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
XM_020542399.1	ncRNA:23   AGUCUAAUAUAUUAGAUUUCAGG   1   |||||||||||||||||||*||| targets:1349   UCAGAUUAUAUAAUCUAAACUCC   1371 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X3, mRNA	NA	coding protein	psRNATarget
XM_008657578.2	ncRNA:23   AGUCUAAUAUAUUAGAUUUCAGG   1   |||||||||||||||||||*||| targets:1349   UCAGAUUAUAUAAUCUAAACUCC   1371 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X2, mRNA	NA	coding protein	psRNATarget
XM_008657579.2	ncRNA:23   AGUCUAAUAUAUUAGAUUUCAGG   1   |||||||||||||||||||*||| targets:1344   UCAGAUUAUAUAAUCUAAACUCC   1366 Target Full Sequence	1.5	PREDICTED: Zea mays acyl-coenzyme A thioesterase 13 (LOC103635012), transcript variant X4, mRNA	NA	coding protein	psRNATarget
XM_008683420.2	ncRNA:23   AGUCUAAUAUAUUAGAUUUCAGG   1   ||||||||||||||||||||*|| targets:119   UCAGAUUAUAUAAUCUAAAGCCC   141 Target Full Sequence	1.5	PREDICTED: Zea mays DnaJ/Hsp40 cysteine-rich domain superfamily protein (LOC100276646), transcript variant X1, mRNA	NA	coding protein	psRNATarget
EU976590.1	ncRNA:23   AGUCUAAUAUAUUAGAUUUCAGG   1   ||||||||||||||||||||*|| targets:1703   UCAGAUUAUAUAAUCUAAAGCCC   1725 Target Full Sequence	1.5	Zea mays clone 984325 mRNA sequence	NA	coding protein	psRNATarget