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BaseInfo

ncRNA ID novel_zma_miR6483
Species Zea mays
Class miRNA
Genome position Chr4:6207222-6207386 [+]
Reference genome RefGen_v4
Source SRR2647386
Length 23
Mature sequence(if miRNA) 143 - CCCUGGGCUUCCAAUAAUAGAGA - 165
Stem-loop(if miRNA) --    G                       A  C                                                U
  UCUA UUGUUGGGAGCCCAGGGCUCUUA UA AUAAACUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUA A
  |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||
  AGAU AAUAACCUUCGGGUCCCGAGAAU AU UAUUUGAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAU U
AG    -                       C  A                                                A
Stem-loop sequence UCUAGUUGUUGGGAGCCCAGGGCUCUUAAUACAUAAACUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAGUUUAUAUACUAAGAGCCCUGGGCUUCCAAUAAUAGAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EU940867.1
ncRNA:23   AGAGAU-AAUAACCUUCGGGUCCC   1
  *|||||-|||||||||||||||||
targets:1701   CCUCUAGUUAUUGGAAGCCCAGGG   1724

2.0 Zea mays clone 1165252 mRNA sequence NA coding protein psRNATarget