ncRNA ID | novel_zma_miR6483 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:6207222-6207386 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647386 |
Length | 23 |
Mature sequence(if miRNA) | 143 - CCCUGGGCUUCCAAUAAUAGAGA - 165 |
Stem-loop(if miRNA) |
--    G                       A  C                                                U   UCUA UUGUUGGGAGCCCAGGGCUCUUA UA AUAAACUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUA A   |||| ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||   AGAU AAUAACCUUCGGGUCCCGAGAAU AU UAUUUGAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAU U AG    -                       C  A                                                A |
Stem-loop sequence | UCUAGUUGUUGGGAGCCCAGGGCUCUUAAUACAUAAACUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAUAGUUUAUAUACUAAGAGCCCUGGGCUUCCAAUAAUAGAGA |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
EU940867.1 |
|
2.0 | Zea mays clone 1165252 mRNA sequence | NA | coding protein | psRNATarget |