ncRNA ID | osa-miRf10245-npr |
Species | Oryza sativa |
Class | miRNA |
Genome position | NA |
Reference genome | NA |
Source | PNRD |
Length | 21 |
Mature sequence(if miRNA) | NA - UCCUUGAGGUACCAUGAGGUA - NA |
Stem-loop(if miRNA) |
    C   A        ---                AAAAAAAUUAG      A           U       AAUU UAC GUCCUUGA   GGUACCAUGAGGUACC           UGUAAA UUUGGUAUCUC UGGUACA |||| ||| ||||||||   ||||||||||||||||           |||||| ||||||||||| ||||||U UUAA AUG UAGGAACU   CCAUGGUACUCCAUGG           ACAUUU AAACCAUGGAG AUCAUGG     A   C        UCU                CAAAAAAGAUA      -           U       |
Stem-loop sequence | AAUUCUACAGUCCUUGAGGUACCAUGAGGUACCAAAAAAAUUAGUGUAAAAUUUGGUAUCUCUUGGUACAUGGUACUAUGAGGUACCAAAUUUACAAUAGAAAAAACGGUACCUCAUGGUACCUCUUCAAGGAUCGUAAAAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
AK102302.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:J033089O08, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015778057.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336087 (LOC4336087), transcript variant X1, mRNA | uncharacterized LOC4336087(LOC4336087) | coding protein | psRNATarget | |||||||||
AK060688.1 |
|
3.0 | Oryza sativa Japonica Group cDNA clone:001-030-A05, full insert sequence | NA | coding protein | psRNATarget | |||||||||
XM_015778058.1 |
|
3.0 | PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336087 (LOC4336087), transcript variant X2, mRNA | uncharacterized LOC4336087(LOC4336087) | coding protein | psRNATarget |