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BaseInfo

ncRNA ID osa-miRf10245-npr
Species Oryza sativa
Class miRNA
Genome position NA
Reference genome NA
Source PNRD
Length 21
Mature sequence(if miRNA) NA - UCCUUGAGGUACCAUGAGGUA - NA
Stem-loop(if miRNA)     C   A        ---                AAAAAAAUUAG      A           U      
AAUU UAC GUCCUUGA   GGUACCAUGAGGUACC           UGUAAA UUUGGUAUCUC UGGUACA
|||| ||| ||||||||   ||||||||||||||||           |||||| ||||||||||| ||||||U
UUAA AUG UAGGAACU   CCAUGGUACUCCAUGG           ACAUUU AAACCAUGGAG AUCAUGG
    A   C        UCU                CAAAAAAGAUA      -           U      
Stem-loop sequence AAUUCUACAGUCCUUGAGGUACCAUGAGGUACCAAAAAAAUUAGUGUAAAAUUUGGUAUCUCUUGGUACAUGGUACUAUGAGGUACCAAAUUUACAAUAGAAAAAACGGUACCUCAUGGUACCUCUUCAAGGAUCGUAAAAUU

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
AK102302.1
ncRNA:21   AUGGAGUACCAUGGAGUUCCU   1
  *|=||**||||||||||||||
targets:871   GAUCUGCUGGUACCUCAAGGA   891

3.0 Oryza sativa Japonica Group cDNA clone:J033089O08, full insert sequence NA coding protein psRNATarget
XM_015778057.1
ncRNA:21   AUGGAGUACCAUGGAGUUCCU   1
  *|=||**||||||||||||||
targets:869   GAUCUGCUGGUACCUCAAGGA   889

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336087 (LOC4336087), transcript variant X1, mRNA uncharacterized LOC4336087(LOC4336087) coding protein psRNATarget
AK060688.1
ncRNA:21   AUGGAGUACCAUGGAGUUCCU   1
  *|=||**||||||||||||||
targets:970   GAUCUGCUGGUACCUCAAGGA   990

3.0 Oryza sativa Japonica Group cDNA clone:001-030-A05, full insert sequence NA coding protein psRNATarget
XM_015778058.1
ncRNA:21   AUGGAGUACCAUGGAGUUCCU   1
  *|=||**||||||||||||||
targets:893   GAUCUGCUGGUACCUCAAGGA   913

3.0 PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4336087 (LOC4336087), transcript variant X2, mRNA uncharacterized LOC4336087(LOC4336087) coding protein psRNATarget