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BaseInfo

ncRNA ID novel_zma_miR6477
Species Zea mays
Class miRNA
Genome position Chr4:57679395-57679474 [-]
Reference genome RefGen_v4
Source SRR2647386;SRR2647389
Length 21
Mature sequence(if miRNA) 60 - GUCCACUAGUACACAGAAGCU - 80
Stem-loop(if miRNA) --GUC       -    --      -----    U      GGU
     CACUAGU ACAC  AGAAGC     UCUA AGUGGC   U
     ||||||| ||||  ||||||     |||| ||||||   C
     GUGAUCG UGUG  UUUUUG     AGAU UUAUCG   U
AGAUC       C    AU      CAGUC    -      AAA
Stem-loop sequence GUCCACUAGUACACAGAAGCUCUAUAGUGGCGGUUCUAAAGCUAUUUAGACUGACGUUUUUUAGUGUCGCUAGUGCUAGA

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
XM_008655475.2
ncRNA:21   UCGAAGACACAUGAUCACCUG   1
  |*|||||*|||||||||||||
targets:404   AACUUCUCUGUACUAGUGGAC   424

1.0 PREDICTED: Zea mays L-type lectin-domain containing receptor kinase IV.1 (LOC103633795), mRNA NA coding protein psRNATarget