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BaseInfo

ncRNA ID	novel_zma_miR6474
Species	Zea mays
Class	miRNA
Genome position	Chr4:192422275-192422337 [-]
Reference genome	RefGen_v4
Source	SRR2647386
Length	24
Mature sequence(if miRNA)	1 - AGUCCGGCACUCGGCAAAGGCCCG - 24
Stem-loop(if miRNA)	--CU               C   AAAAG  A     CCUUUGCCGAGUGCC GAC     GC C     ||||||||||||||| |||     || U     GGAAACGGCUCACGG CUG     CG C GCCC               C   AGAAA  G
Stem-loop sequence	CUCCUUUGCCGAGUGCCCGACAAAAGGCACUCGGCAAAGAGUCCGGCACUCGGCAAAGGCCCG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU962802.1	ncRNA:24   GCCCGGAAACGGCUCACGGCCUGA   1   ||||*||||||||||||||||||* targets:824   CGGGACUUUGCCGAGUGCCGGACG   847 Target Full Sequence	1.0	Zea mays clone 245661 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
HI408565.1	ncRNA:24   GCCCGGAAACGGCUCACGGCCUGA   1   |||--|||||||||||||||*||* targets:49   CGG--CUUUGCCGAGUGCCGCACA   70 Target Full Sequence	2.5	Sequence 6690 from Patent EP2074227	NA	coding protein	psRNATarget
JB169026.1	ncRNA:24   GCCCGGAAACGGCUCACGGCCUGA   1   |||--|||||||||||||||*||* targets:49   CGG--CUUUGCCGAGUGCCGCACA   70 Target Full Sequence	2.5	Sequence 6690 from Patent EP2559767	NA	coding protein	psRNATarget
LQ240695.1	ncRNA:24   GCCCGGAAACGGCUCACGGCCUGA   1   |||--|||||||||||||||*||* targets:49   CGG--CUUUGCCGAGUGCCGCACA   70 Target Full Sequence	2.5	Sequence 6690 from Patent EP2985353	NA	coding protein	psRNATarget
XM_008671736.2	ncRNA:24   GCCCGGAAACGGCUCACGGCCUGA   1   |*||*||||||||||||||*|||* targets:250   CAGGACUUUGCCGAGUGCCCGACA   273 Target Full Sequence	2.5	PREDICTED: Zea mays probable serine/threonine-protein kinase PBL28 (LOC103647166), mRNA	NA	coding protein	psRNATarget