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BaseInfo

ncRNA ID	novel_zma_miR6470
Species	Zea mays
Class	miRNA
Genome position	Chr4:227895146-227895240 [+]
Reference genome	RefGen_v4
Source	SRR2647386
Length	24
Mature sequence(if miRNA)	72 - UAUAAUCUGGACAACUUAUAAUCC - 95
Stem-loop(if miRNA)	--       UC  CU                                   AUUAUAA  UG  CAGAUUAUAUAAUCCAACAAAUUUUGAACUAGC   |||||||  ||  ||||||||||||||||||||||||||||||||A   UAAUAUU  AC  GUCUAAUAUAUUAGGUUGUUUAAAACUUGAUCC CC       CA  AG
Stem-loop sequence	AUUAUAAUCUGCUCAGAUUAUAUAAUCCAACAAAUUUUGAACUAGCACCUAGUUCAAAAUUUGUUGGAUUAUAUAAUCUGGACAACUUAUAAUCC

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
BT084023.2	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   |||||||||*|||*|||||||||| targets:427   GGAUUAUAAUUUGCCCAGAUUAUA   450 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0066F23 mRNA, complete cds	NA	coding protein	psRNATarget
EU944194.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   |||||||||**||||||||||||| targets:278   GGAUUAUAAUCUGUCCAGAUUAUA   301 Target Full Sequence	2.0	Zea mays clone 1711585 mRNA sequence	NA	coding protein	psRNATarget
EU948493.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   |||||||||**||||||||||||| targets:252   GGAUUAUAAUCUGUCCAGAUUAUA   275 Target Full Sequence	2.0	Zea mays clone 378933 mRNA sequence	NA	coding protein	psRNATarget
XM_008682894.2	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   *||||||||**||||||||||||| targets:4978   AGAUUAUAAUAUGUCCAGAUUAUA   5001 Target Full Sequence	2.0	PREDICTED: Zea mays transducin family protein / WD-40 repeat family protein (si618080f12(37)), transcript variant X5, mRNA	NA	coding protein	psRNATarget
HI403307.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   *||||||||**||||||||||||| targets:17   AGAUUAUAAUCUGUCCAGAUUAUA   40 Target Full Sequence	2.0	Sequence 1432 from Patent EP2074227	NA	coding protein	psRNATarget
JB163768.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   *||||||||**||||||||||||| targets:17   AGAUUAUAAUCUGUCCAGAUUAUA   40 Target Full Sequence	2.0	Sequence 1432 from Patent EP2559767	NA	coding protein	psRNATarget
HI403423.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   *||||||||**||||||||||||| targets:17   AGAUUAUAAUCUGUCCAGAUUAUA   40 Target Full Sequence	2.0	Sequence 1548 from Patent EP2074227	NA	coding protein	psRNATarget
LQ235553.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   *||||||||**||||||||||||| targets:17   AGAUUAUAAUCUGUCCAGAUUAUA   40 Target Full Sequence	2.0	Sequence 1548 from Patent EP2985353	NA	coding protein	psRNATarget
JB163884.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   *||||||||**||||||||||||| targets:17   AGAUUAUAAUCUGUCCAGAUUAUA   40 Target Full Sequence	2.0	Sequence 1548 from Patent EP2559767	NA	coding protein	psRNATarget
LQ235437.1	ncRNA:24   CCUAAUAUUCAACAGGUCUAAUAU   1   *||||||||**||||||||||||| targets:17   AGAUUAUAAUCUGUCCAGAUUAUA   40 Target Full Sequence	2.0	Sequence 1432 from Patent EP2985353	NA	coding protein	psRNATarget
EU945446.1	ncRNA:24   CCU-AAUAUUCAACAGGUCUAAUAU   1   |||-||||||**||||||||||||| targets:431   GGAAUUAUAAUCUGUCCAGAUUAUA   455 Target Full Sequence	2.0	Zea mays clone 273503 mRNA sequence	NA	coding protein	psRNATarget