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BaseInfo

ncRNA ID novel_zma_miR6469
Species Zea mays
Class miRNA
Genome position Chr4:210848443-210848519 [+]
Reference genome RefGen_v4
Source SRR2647386;SRR2647390;SRR4237223
Length 24
Mature sequence(if miRNA) 1 - ACUGGCGGUUCUGUUACACCAACU - 24
Stem-loop(if miRNA) --          -C   U   CC        A      C
  ACUGGCGGUU  UGU ACA  AACUGCCA UGGAAA U
  ||||||||||  ||| |||  |||||||| |||||| A
  UGACCGCCAA  ACA UGU  UUGGCGGU ACUUUU U
GG          CU   U   -C        C      A
Stem-loop sequence ACUGGCGGUUCUGUUACACCAACUGCCAAUGGAAACUAUAUUUUCACUGGCGGUUCUGUUACAUCAACCGCCAGUGG

Targets Info

Target Acc Alignment Exception Target Description Target Gene Name Target Type Method
EZ101180.1
ncRNA:24   UCAACCACAUUGUCUUGGCGGUCA   1
  =***|||||||||||||||*||||
targets:22   GCCAGGUGUAACAGAACCGACAGU   45

1.5 TSA: Zea mays contig36836, mRNA sequence NA coding protein psRNATarget