ncRNA ID | novel_zma_miR6463 |
Species | Zea mays |
Class | miRNA |
Genome position | Chr4:148036718-148036834 [+] |
Reference genome | RefGen_v4 |
Source | SRR2647386 |
Length | 22 |
Mature sequence(if miRNA) | 1 - UGAUCAAAUAAUAUUAUACAUU - 22 |
Stem-loop(if miRNA) |
--- G     A   U       A UG       GUG     AUAU     -   -    GA    U AUCAA UAA AUUAUAC U  GAUUUGA   AAUAU    GUGAG GGU UAUG  G    | ||||| ||| ||||||| |  |||||||   |||||    ||||| ||| ||||    G UAGUU GUU UAAUGUG G  CUGAAUU   UUGUA    UACUU CCA GUAU  C UUA G     A   -       - GU       GUG     GUUU     A   A    AG |
Stem-loop sequence | UGAUCAAAUAAUAUUAUACAUUGGAUUUGAGUGAAUAUAUAUGUGAGGGUUAUGGAGCGAUAUGAACCAUUCAUUUUGAUGUUGUGUUAAGUCUGGGUGUAAUUUGAUUGAUGGAUU |
Target Acc | Alignment | Exception | Target Description | Target Gene Name | Target Type | Method | |||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
XM_008666132.2 |
|
2.0 | PREDICTED: Zea mays probable glucuronosyltransferase Os05g0559600 (LOC103642988), transcript variant X5, mRNA | NA | coding protein | psRNATarget | |||||||||
EZ064107.1 |
|
2.0 | TSA: Zea mays contig65230, mRNA sequence | NA | coding protein | psRNATarget |