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BaseInfo

ncRNA ID	novel_zma_miR6456
Species	Zea mays
Class	miRNA
Genome position	Chr10:32399359-32399412 [+]
Reference genome	RefGen_v4
Source	SRR2647386
Length	24
Mature sequence(if miRNA)	1 - CUCAAACCCGUACCCUAAUGGGGU - 24
Stem-loop(if miRNA)	--   -       -U    UA     GU   CUC AAACCCG  ACCC  AUGGG  A   ||| |||||||  ||||  |||||  A   GGG UUUGGGC  UGGG  UACCC  A AU   C       UU    -C     AA
Stem-loop sequence	CUCAAACCCGUACCCUAAUGGGGUAAAAACCCAUCGGGUUUCGGGUUUCGGGUA

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
JB166280.1	ncRNA:24   UGGGGUAAUCCCAUGCCCAAACUC   1   ||||||||||||||||||||||=| targets:39   ACCCCAUUAGGGUACGGGUUUGGG   62 Target Full Sequence	1.5	Sequence 3944 from Patent EP2559767	NA	coding protein	psRNATarget
HI405819.1	ncRNA:24   UGGGGUAAUCCCAUGCCCAAACUC   1   ||||||||||||||||||||||=| targets:39   ACCCCAUUAGGGUACGGGUUUGGG   62 Target Full Sequence	1.5	Sequence 3944 from Patent EP2074227	NA	coding protein	psRNATarget
LQ237949.1	ncRNA:24   UGGGGUAAUCCCAUGCCCAAACUC   1   ||||||||||||||||||||||=| targets:39   ACCCCAUUAGGGUACGGGUUUGGG   62 Target Full Sequence	1.5	Sequence 3944 from Patent EP2985353	NA	coding protein	psRNATarget
XM_020548741.1	ncRNA:24   UGGGGUAAUCCCAUGCCCAAACUC   1   *|||=||||||||||||||*|||| targets:83   CCCCUAUUAGGGUACGGGUAUGAG   106 Target Full Sequence	1.5	PREDICTED: Zea mays uncharacterized LOC103649505 (LOC103649505), transcript variant X1, mRNA	NA	coding protein	psRNATarget
BT069629.1	ncRNA:24   UGGGGUAAUCCCAUGCCCAAACUC   1   *||==||||||||||||||*|||| targets:968   CCCUUAUUAGGGUACGGGUAUGAG   991 Target Full Sequence	1.5	Zea mays full-length cDNA clone ZM_BFb0188I06 mRNA, complete cds	NA	coding protein	psRNATarget
XM_008658350.2	ncRNA:24   UGGGGUAAUCCCAUGCCCAAACUC   1   *||==||||||||||||||*|||| targets:982   CCCUUAUUAGGGUACGGGUAUGAG   1005 Target Full Sequence	1.5	PREDICTED: Zea mays NADH dehydrogenase [ubiquinone] 1 beta subcomplex subunit 2 (LOC100275017), transcript variant X1, mRNA	NA	coding protein	psRNATarget