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BaseInfo

ncRNA ID	novel_zma_miR6452
Species	Zea mays
Class	miRNA
Genome position	Chr3:232049027-232049108 [+]
Reference genome	RefGen_v4
Source	SRR2647385
Length	24
Mature sequence(if miRNA)	1 - GUUCCUUGUGUGCCACUGGCCCCA - 24
Stem-loop(if miRNA)	--GUUC               CCCCA     -CA    CACC       CUUGUGUGCCACUGG     CAUGU   UACA    A       |||||||||||||||     |||||   ||||       GAACACACGGUGACU     GUAUA   AUGU    A GGUAAA               -CACC     UCC    AAAA
Stem-loop sequence	GUUCCUUGUGUGCCACUGGCCCCACAUGUCAUACACACCAAAAAAUGUACCUAUAUGCCACUCAGUGGCACACAAGAAAUGG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
EU975854.1	ncRNA:24   ACCCCGGUCACCGUGUGUUCCUUG   1   |||||||||||||||||||||=|= targets:709   UGGGGCCAGUGGCACACAAGGGAU   732 Target Full Sequence	2.5	Zea mays clone 503152 chaperone protein dnaJ mRNA, complete cds	NA	coding protein	psRNATarget
BT085283.1	ncRNA:24   ACCCCGGUCACCGUGUGUUCCUUG   1   |||||||||||||||||||||=|= targets:962   UGGGGCCAGUGGCACACAAGGGAU   985 Target Full Sequence	2.5	Zea mays full-length cDNA clone ZM_BFb0360M07 mRNA, complete cds	NA	coding protein	psRNATarget
EU956996.1	ncRNA:24   ACCCCGGUCACCGUGUGUUCCUUG   1   ||||||||||||||=||||||||= targets:1624   UGGGGCCAGUGGCAUACAAGGAAU   1647 Target Full Sequence	2.5	Zea mays clone 1579828 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget
EU967272.1	ncRNA:24   ACCCCGGUCACCGUGUGUUCCUUG   1   *****|||||||||=||||||||= targets:629   AUUUUCCAGUGGCAUACAAGGAAU   652 Target Full Sequence	2.5	Zea mays clone 300934 hypothetical protein mRNA, complete cds	NA	coding protein	psRNATarget