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BaseInfo

ncRNA ID	osa-miRf10241-npr
Species	Oryza sativa
Class	miRNA
Genome position	NA
Reference genome	NA
Source	PNRD
Length	23
Mature sequence(if miRNA)	NA - CCGGUUGGAGUUACCAACCGGGA - NA
Stem-loop(if miRNA)	G               UUA          AA    AUCA UAUUU UAGUCCCGGUUGGUG   CCAACCGGGA  AAAG    A ||||| |||||||||||||||   ||||||||||  ||||    C GUAGA AUCAGGGCCAACCAU   GGUUGGCCCU  UUUC    A      A               UGA          CA    GAAU
Stem-loop sequence	UAUUUGUAGUCCCGGUUGGUGUUACCAACCGGGAAAAAAGAUCAACAUAAGCUUUACUCCCGGUUGGAGUUACCAACCGGGACUAAAGAUG

Targets Info

Target Acc	Alignment	Exception	Target Description	Target Gene Name	Target Type	Method
AK288438.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   ||||||||||||||||||||||| targets:2372   UCCCGGUUGGUAACUCCAACCGG   2394 Target Full Sequence	0.0	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   *|||||||||||||*|||||||| targets:1320   CCCCGGUUGGUAACACCAACCGG   1342 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK288438.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   ||||||||*|*|||||||||||| targets:2335   UCCCGGUUCGGAACUCCAACCGG   2357 Target Full Sequence	2.5	Oryza sativa Japonica Group cDNA, clone: J090034C21, full insert sequence	NA	coding protein	psRNATarget
AK242216.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   ||||||||||||||*|||||||| targets:667   UCCCGGUUGGUAACACCAACCGG   689 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J075172F09, full insert sequence	NA	coding protein	psRNATarget
AK289098.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   ||||||||||||||*|||||||| targets:247   UCCCGGUUGGUAACACCAACCGG   269 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090096E23, full insert sequence	NA	coding protein	psRNATarget
AK288224.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   ||||||||||||||*|||||||| targets:1852   UCCCGGUUGGUAACACCAACCGG   1874 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090012B15, full insert sequence	NA	coding protein	psRNATarget
AK288734.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   ||||||||||||||*|||||||| targets:56   UCCCGGUUGGUAACACCAACCGG   78 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA, clone: J090063I24, full insert sequence	NA	coding protein	psRNATarget
AK119354.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   |||=||||||||||*|||||||| targets:74   UCCUGGUUGGUAACACCAACCGG   96 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:001-131-F10, full insert sequence	NA	coding protein	psRNATarget
XM_015792800.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   |||=||||||||||*|||||||| targets:683   UCCUGGUUGGUAACACCAACCGG   705 Target Full Sequence	1.5	PREDICTED: Oryza sativa Japonica Group uncharacterized LOC4346359 (LOC4346359), transcript variant X3, mRNA	uncharacterized LOC4346359(LOC4346359)	coding protein	psRNATarget
AK121472.1	ncRNA:23   AGGGCCAACCAUUGAGGUUGGCC   1   |=||||||||||||*|||||||| targets:2069   UUCCGGUUGGUAACACCAACCGG   2091 Target Full Sequence	1.5	Oryza sativa Japonica Group cDNA clone:J023148H10, full insert sequence	NA	coding protein	psRNATarget
XM_015758676.1	ncRNA:23   AGG-GCCAACCAUUGAGGUUGGCC   1   |||-|||||*|||||*|||||||| targets:1986   UCCUCGGUUAGUAACACCAACCGG   2009 Target Full Sequence	2.5	PREDICTED: Oryza sativa Japonica Group polyubiquitin-like (LOC107279205), mRNA	polyubiquitin-like(LOC107279205)	coding protein	psRNATarget